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AT1G44100.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : amino acid permease 5
Curator
Summary (TAIR10)
amino acid permease 5
Computational
Description (TAIR10)
amino acid permease 5 (AAP5); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: amino acid permease 3 (TAIR:AT1G77380.1); Has 2256 Blast hits to 2241 proteins in 209 species: Archae - 0; Bacteria - 0; Metazoa - 536; Fungi - 289; Plants - 1230; Viruses - 0; Other Eukaryotes - 201 (source: NCBI BLink).
Protein Annotations
BioGrid:26238eggNOG:COG0814eggNOG:KOG1303EMBL:AC074228
EMBL:BT002389EMBL:BT009680EMBL:CP002684EMBL:X77501
EnsemblPlants:AT1G44100EnsemblPlants:AT1G44100.1entrez:841013GeneID:841013
Genevisible:Q8GUM3GO:GO:0003333GO:GO:0005886GO:GO:0015171
GO:GO:0015174GO:GO:0015293GO:GO:0015802GO:GO:0015809
GO:GO:0016021GO:GO:1990822Gramene:AT1G44100.1hmmpanther:PTHR22950
hmmpanther:PTHR22950:SF205HOGENOM:HOG000238530InParanoid:Q8GUM3InterPro:IPR013057
KEGG:ath:AT1G44100OMA:PCHVNGNPaxDb:Q8GUM3Pfam:PF01490
Pfam:Q8GUM3PhylomeDB:Q8GUM3PIR:C57479PIR:C96505
PRIDE:Q8GUM3PRO:PR:Q8GUM3ProteinModelPortal:Q8GUM3Proteomes:UP000006548
RefSeq:NP_175076.2STRING:3702.AT1G44100.1TAIR:AT1G44100tair10-symbols:AAP5
TMHMM:TMhelixUniGene:At.25385UniGene:At.67092UniProt:Q8GUM3
Coordinates (TAIR10) chr1:-:16764651..16767223
Molecular Weight (calculated) 52541.20 Da
IEP (calculated) 8.38
GRAVY (calculated) 0.48
Length 480 amino acids
Sequence (TAIR10)
(BLAST)
001: MVVQNVQDLD VLPKHSSDSF DDDGRPKRTG TVWTASAHII TAVIGSGVLS LAWAVAQIGW IGGPVAMLLF SFVTFYTSTL LCSCYRSGDS VTGKRNYTYM
101: DAIHSNLGGI KVKVCGVVQY VNLFGTAIGY TIASAISLVA IQRTSCQQMN GPNDPCHVNG NVYMIAFGIV QIIFSQIPDF DQLWWLSIVA AVMSFAYSAI
201: GLGLGVSKVV ENKEIKGSLT GVTVGTVTLS GTVTSSQKIW RTFQSLGNIA FAYSYSMILI EIQDTVKSPP AEVNTMRKAT FVSVAVTTVF YMLCGCVGYA
301: AFGDNAPGNL LAHGGFRNPY WLLDIANLAI VIHLVGAYQV YCQPLFAFVE KEASRRFPES EFVTKEIKIQ LFPGKPFNLN LFRLVWRTFF VMTTTLISML
401: MPFFNDVVGL LGAIGFWPLT VYFPVEMYIA QKNVPRWGTK WVCLQVLSVT CLFVSVAAAA GSVIGIVSDL KVYKPFQSEF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)