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AT1G75020.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.968
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : lysophosphatidyl acyltransferase 4
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
lysophosphatidyl acyltransferase 4 (LPAT4); FUNCTIONS IN: acyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: lysophosphatidyl acyltransferase 5 (TAIR:AT3G18850.4); Has 2097 Blast hits to 2094 proteins in 638 species: Archae - 0; Bacteria - 957; Metazoa - 532; Fungi - 179; Plants - 135; Viruses - 4; Other Eukaryotes - 290 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G75020-MONOMERBioCyc:ARA:GQT-2611-MONOMERBioGrid:29059BRENDA:2.3.1.51
EC:2.3.1.51eggNOG:COG0204eggNOG:KOG1505EMBL:AC008263
EMBL:AC013258EMBL:AY084709EMBL:AY099547EMBL:BT001236
EMBL:CP002684EnsemblPlants:AT1G75020EnsemblPlants:AT1G75020.1EnsemblPlants:AT1G75020.2
entrez:843840GeneID:843840Genevisible:Q8L4Y2GO:GO:0003841
GO:GO:0016021GO:GO:0016024Gramene:AT1G75020.1Gramene:AT1G75020.2
gramene_pathway:2.3.1.51gramene_pathway:PWY-5667gramene_pathway:PWY0-1319gramene_pathway:TRIGLSYN-PWY
hmmpanther:PTHR10983hmmpanther:PTHR10983:SF25HOGENOM:HOG000005662InParanoid:Q8L4Y2
IntAct:Q8L4Y2InterPro:IPR002123InterPro:IPR032098KEGG:00561+2.3.1.51
KEGG:00564+2.3.1.51KEGG:ath:AT1G75020KO:K13513OMA:RDSHISH
PaxDb:Q8L4Y2Pfam:PF01553Pfam:PF16076Pfam:Q8L4Y2
PhylomeDB:Q8L4Y2PIR:B96780PRIDE:Q8L4Y2PRO:PR:Q8L4Y2
ProteinModelPortal:Q8L4Y2Proteomes:UP000006548Reactome:R-ATH-1482798Reactome:R-ATH-1483166
Reactome:R-ATH-75109RefSeq:NP_565098.1RefSeq:NP_974144.1SMART:SM00563
STRING:3702.AT1G75020.1SUPFAM:0039877TAIR:AT1G75020tair10-symbols:LPAT4
TMHMM:TMhelixUniGene:At.43179UniPathway:UPA00557UniProt:Q8L4Y2
Coordinates (TAIR10) chr1:+:28171779..28173357
Molecular Weight (calculated) 43066.00 Da
IEP (calculated) 8.39
GRAVY (calculated) 0.20
Length 378 amino acids
Sequence (TAIR10)
(BLAST)
001: MEVCGDLKSD NLKNRPLTPL RILRGLMILL VFLSTAFMFL LYFAPIAALG LRLLSVQQSR KVVSLIFGLW LALWPYLFET VNGTTVVFSG DIIPVEKRVL
101: LIANHRTEVD WMYLWNIALR KGCLGYIKYV LKSSLMKLPI FGWGFHVLEF IPVERKREVD EPVLLQMLSS FKDPQEPLWL ALFPEGTDFT EEKCKRSQKF
201: AAEVGLPALS NVLLPKTRGF GVCLEVLHNS LDAVYDLTIA YKPRCPSFMD NVFGTDPSEV HIHVRRVLLK EIPANEAESS AWLMDSFKLK DKLLSDFNAQ
301: GKFPNQRPEE ELSVLKCIAT FAGVISLTVV FIYLTLYSHS CFKVYACLSG TYLTFATYYK FQPSPGCFRE DSCKVKNH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)