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AT1G71880.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31541795 (2020): plasma membrane
  • PMID:30447334 (2019): plasma membrane
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:26781341 (2016): plasma membrane
  • PMID:25641898 (2015): plasma membrane
  • PMID:23990937 (2013): plasma membrane
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:22318864 (2012): plasma membrane
  • PMID:21988472 (2012): plant-type vacuole plant-type vacuole membrane
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:19334764 (2009): plasma membrane
  • PMID:18686298 (2008): plant-type vacuole plant-type vacuole membrane
  • PMID:17317660 (2007): plasma membrane
  • PMID:15574830 (2004): plasma membrane
  • PMID:15215502 (2004): plant-type vacuole
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : sucrose-proton symporter 1
Curator
Summary (TAIR10)
Sucrose transporter gene induced in response to nematodes; member of Sucrose-proton symporter family.
Computational
Description (TAIR10)
sucrose-proton symporter 1 (SUC1); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity, sucrose:hydrogen symporter activity; INVOLVED IN: pollen germination, response to nematode; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sucrose/H+ symporter, plant (InterPro:IPR005989), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G71890.1); Has 2274 Blast hits to 2182 proteins in 558 species: Archae - 37; Bacteria - 864; Metazoa - 396; Fungi - 188; Plants - 414; Viruses - 0; Other Eukaryotes - 375 (source: NCBI BLink).
Protein Annotations
BioCyc:MetaCyc:AT1G71880-MONOMERBioGrid:28739eggNOG:ENOG410XPTReggNOG:KOG0637
EMBL:AC021665EMBL:AY049275EMBL:BT020416EMBL:CP002684
EMBL:X75365EnsemblPlants:AT1G71880EnsemblPlants:AT1G71880.1entrez:843519
GeneID:843519Genevisible:Q39232GO:GO:0005773GO:GO:0005774
GO:GO:0005886GO:GO:0005887GO:GO:0005985GO:GO:0008506
GO:GO:0009506GO:GO:0009624GO:GO:0009846Gramene:AT1G71880.1
hmmpanther:PTHR19432hmmpanther:PTHR19432:SF38HOGENOM:HOG000239187InParanoid:Q39232
InterPro:IPR005989InterPro:IPR020846iPTMnet:Q39232KEGG:ath:AT1G71880
KO:K15378OMA:DMAWSWQPaxDb:Q39232Pfam:Q39232
PhylomeDB:Q39232PIR:S38197PRIDE:Q39232PRO:PR:Q39232
ProteinModelPortal:Q39232Proteomes:UP000006548RefSeq:NP_177333.1SABIO-RK:Q39232
STRING:3702.AT1G71880.1SUPFAM:SSF103473TAIR:AT1G71880tair10-symbols:ATSUC1
tair10-symbols:SUC1TCDB:2.A.2.4.1TIGRfam:TIGR01301TIGRFAMs:TIGR01301
TMHMM:TMhelixUniGene:At.23741UniPathway:UPA00238UniProt:Q39232
Coordinates (TAIR10) chr1:+:27054334..27056100
Molecular Weight (calculated) 54861.40 Da
IEP (calculated) 9.16
GRAVY (calculated) 0.47
Length 513 amino acids
Sequence (TAIR10)
(BLAST)
001: MGAYETEKPT KDAAALETQS PEDFDQPSPL RKIISVASIA AGVQFGWALQ LSLLTPYVQL LGIPHKWSSL IWLCGPVSGM IVQPIVGFHS DRCRSKFGRR
101: RPFIATGAAL VAVAVFLIGY AADFGYKMGD KLEEKVKVRA IGIFALGFWI LDVANNTLQG PCRAFLADLA AGDAKRTRVA NAFFSFFMAV GNVLGYAAGS
201: YTNLHKMFPF TMTKACDIYC ANLKTCFFLS ITLLLIVTVT SLWYVNDKQW SPPPRNADDD EKTSSVPLFG EIFGAFKVMK RPMWMLLIVT ALNWIAWFPF
301: LLFDTDWMGR EVFGGDSDGN ERSKKLYSLG VQSGAMGLMF NSIVLGFMSL GVEWIGRKLG GAKRLWGIVN FILAAGLAMT VLVTKFAEDH RKTAGDLAGP
401: SASVKAGALS LFAVLGIPLA ITFSTPFALA SIFSSCSGAG QGLSLGVLNL AIVIPQMIVS LGGGPFDALF GGGNLPAFIV AAIAAAISGV LALTVLPSPP
501: PDAPKATTMG GFH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)