suba logo
AT5G65670.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
nucleus 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : indole-3-acetic acid inducible 9
Curator
Summary (TAIR10)
auxin (indole-3-acetic acid) induced gene
Computational
Description (TAIR10)
indole-3-acetic acid inducible 9 (IAA9); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indoleacetic acid-induced protein 8 (TAIR:AT2G22670.4); Has 2126 Blast hits to 2124 proteins in 85 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 3; Plants - 2121; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
BioGrid:21935eggNOG:ENOG410IV98eggNOG:ENOG4111VTJEMBL:AB010075EMBL:AF334715EMBL:AL021684EMBL:AY087089
EMBL:CP002688EMBL:U18411EnsemblPlants:AT5G65670EnsemblPlants:AT5G65670.1entrez:836693ExpressionAtlas:Q38827GeneID:836693
Genevisible:Q38827GO:GO:0003700GO:GO:0005634GO:GO:0006351GO:GO:0009733GO:GO:0009734hmmpanther:PTHR31734
hmmpanther:PTHR31734:SF24HOGENOM:HOG000238261InParanoid:Q38827IntAct:Q38827InterPro:IPR000270InterPro:IPR003311InterPro:IPR033389
iPTMnet:Q38827OMA:QSHATNGPANTHER:PTHR31734PaxDb:Q38827Pfam:PF02309Pfam:Q38827Pfscan:PS51745
PhylomeDB:Q38827PIR:T05902PRIDE:Q38827PRO:PR:Q38827PROSITE:PS51745ProteinModelPortal:Q38827Proteomes:UP000006548
RefSeq:NP_851275.1SMR:Q38827STRING:3702.AT5G65670.1SUPFAM:SSF54277TAIR:AT5G65670tair10-symbols:IAA9UniGene:At.20107
UniProt:Q38827
Coordinates (TAIR10) chr5:+:26254463..26256134
Molecular Weight (calculated) 36407.00 Da
IEP (calculated) 6.11
GRAVY (calculated) -0.49
Length 338 amino acids
Sequence (TAIR10)
(BLAST)
001: MSPEEELQSN VSVASSSPTS NCISRNTLGG LKEHNYLGLS DCSSVGSSTL SPLAEDDKAT ISLKATELTL GLPGSQSPAR DTELNLLSPA KLDEKPFFPL
101: LPSKDEICSS SQKNNASGNK RGFSDTMDQF AEAKSSVYTE KNWMFPEAAA TQSVTKKDVP QNIPKGQSST TNNSSSPPAA KAQIVGWPPV RSYRKNTLAT
201: TCKNSDEVDG RPGSGALFVK VSMDGAPYLR KVDLRSYTNY GELSSALEKM FTTFTLGQCG SNGAAGKDML SETKLKDLLN GKDYVLTYED KDGDWMLVGD
301: VPWEMFIDVC KKLKIMKGCD AIGLAAAPRA MEKSKMRA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)