suba logo
AT5G15160.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : BANQUO 2
Curator
Summary (TAIR10)
BNQ2 belongs to a family of atypical non-DNA binding basic helix-loop-helix (bHLH) proteins that heterodimerize with and negatively regulate bHLH transcription factors. Directly and negatively regulated by AP3 and PI in petals.Required for appropriate regulation of flowering time.
Computational
Description (TAIR10)
BANQUO 2 (BNQ2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: photomorphogenesis, regulation of timing of transition from vegetative to reproductive phase; LOCATED IN: vacuole; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding family protein (TAIR:AT3G28857.1); Has 97 Blast hits to 97 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 97; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioGrid:16645eggNOG:ENOG410JV97eggNOG:ENOG411064BEMBL:AK118887EMBL:AL353993EMBL:BT005460EMBL:CP002688
EnsemblPlants:AT5G15160EnsemblPlants:AT5G15160.1entrez:831368Gene3D:4.10.280.10GeneID:831368Genevisible:Q9LXG5GO:GO:0003700
GO:GO:0005634GO:GO:0005773GO:GO:0006351GO:GO:0009640GO:GO:0009740GO:GO:0040008GO:GO:0048510
Gramene:AT5G15160.1hmmpanther:PTHR12565hmmpanther:PTHR12565:SF172HOGENOM:HOG000239487InParanoid:Q9LXG5IntAct:Q9LXG5InterPro:IPR011598
iPTMnet:Q9LXG5KEGG:ath:AT5G15160ncoils:CoilOMA:NRRSNKAPaxDb:Q9LXG5Pfam:PF00010Pfam:Q9LXG5
Pfscan:PS50888PhylomeDB:Q9LXG5PIR:T49951PRIDE:Q9LXG5PRO:PR:Q9LXG5PROSITE:PS50888ProteinModelPortal:Q9LXG5
Proteomes:UP000006548RefSeq:NP_197020.1STRING:3702.AT5G15160.1SUPFAM:SSF47459TAIR:AT5G15160tair10-symbols:BHLH134tair10-symbols:BNQ2
UniGene:At.1763UniProt:Q9LXG5
Coordinates (TAIR10) chr5:-:4921487..4922553
Molecular Weight (calculated) 10546.30 Da
IEP (calculated) 10.11
GRAVY (calculated) -0.76
Length 94 amino acids
Sequence (TAIR10)
(BLAST)
1: MSSSRRSRQA SSSSRISDDQ ITDLISKLRQ SIPEIRQNRR SNTVSASKVL QETCNYIRNL NKEADDLSDR LTQLLESIDP NSPQAAVIRS LING
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)