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AT3G17600.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : indole-3-acetic acid inducible 31
Curator
Summary (TAIR10)
Encodes a member of the Aux/IAA family of proteins implicated in auxin signaling. IAA31 shares several residues with the conserved domain II region, believed to act as a degron in many of the rapidly degraded Aux/IAA family members. An IAA31 fusion protein is quite long-lived, but can be degraded more rapidly in the presence of auxin. Unlike many other family members, IAA31 transcript levels do not rise in response to auxin. Nevertheless, overexpression of IAA31 leads to defects in auxin-related processes such as gravitropism, root development, shoot development, and cotyledon vascular development.
Computational
Description (TAIR10)
indole-3-acetic acid inducible 31 (IAA31); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: gravitropism, response to auxin stimulus, shoot system development, root development; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: stem, rosette leaf, fruit, root, flower; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 30 (TAIR:AT3G62100.1); Has 1954 Blast hits to 1953 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1953; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IYJUeggNOG:ENOG410YIRAEMBL:AY669802EMBL:GU348639EMBL:GU348641EMBL:GU348642EMBL:HM487919
EMBL:HM487920EMBL:HM487921EMBL:HM487922EMBL:HM487924EMBL:HM487925EMBL:HM487926EMBL:HM487927
EnsemblPlants:AT3G17600EnsemblPlants:AT3G17600.1entrez:821026GeneID:821026GO:GO:0005634GO:GO:0006351GO:GO:0006355
GO:GO:0009734Gramene:AT3G17600.1hmmpanther:PTHR31734hmmpanther:PTHR31734:SF3IntAct:Q8H174InterPro:IPR000270InterPro:IPR003311
InterPro:IPR033389KEGG:ath:AT3G17600KO:K14484OMA:KITRPERPANTHER:PTHR31734Pfam:PF02309Pfam:Q8H174
Pfscan:PS51745PROSITE:PS51745RefSeq:NP_188387.1SMR:Q8H174STRING:3702.AT3G17600.1SUPFAM:SSF54277TAIR:AT3G17600
tair10-symbols:IAA31UniGene:At.22356UniProt:D3K0M2UniProt:Q8H174
Coordinates (TAIR10) chr3:-:6020281..6021040
Molecular Weight (calculated) 18155.60 Da
IEP (calculated) 8.06
GRAVY (calculated) -0.56
Length 158 amino acids
Sequence (TAIR10)
(BLAST)
001: MEVSNSCSSF SSSSVDSTKP SPSESSVNLS LSLTFPSTSP QREARQDWPP IKSRLRDTLK GRRLLRRGDD TSLFVKVYME GVPIGRKLDL CVFSGYESLL
101: ENLSHMFDTS IICGNRDRKH HVLTYEDKDG DWMMVGDIPW DMFLETVRRL KITRPERY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)