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AT5G45800.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Leucine-rich repeat protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
maternal effect embryo arrest 62 (MEE62); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, embryo development ending in seed dormancy; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G24230.1); Has 86435 Blast hits to 54726 proteins in 1691 species: Archae - 65; Bacteria - 6179; Metazoa - 19674; Fungi - 1594; Plants - 54067; Viruses - 116; Other Eukaryotes - 4740 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G45800-MONOMEReggNOG:ENOG410IJ8YeggNOG:ENOG410XUCBEMBL:AB012245
EMBL:AY072097EMBL:AY096584EMBL:CP002688EMBL:FJ708790
EnsemblPlants:AT5G45800EnsemblPlants:AT5G45800.1entrez:834620Gene3D:2.60.120.200
Gene3D:3.80.10.10GeneID:834620GO:GO:0004672GO:GO:0005524
GO:GO:0009793GO:GO:0016021Gramene:AT5G45800.1hmmpanther:PTHR27000
hmmpanther:PTHR27000:SF154InterPro:IPR000719InterPro:IPR001245InterPro:IPR001611
InterPro:IPR003591InterPro:IPR011009InterPro:IPR013320InterPro:IPR025875
InterPro:IPR032675KEGG:ath:AT5G45800OMA:HFGKESLPfam:PF07714
Pfam:PF12799Pfam:PF13855Pfscan:PS50011Pfscan:PS51450
PhylomeDB:Q9FK63PROSITE:PS50011PROSITE:PS51450Proteomes:UP000006548
RefSeq:NP_199392.1SMART:SM00369SMR:Q9FK63SUPFAM:SSF52058
SUPFAM:SSF56112TAIR:AT5G45800tair10-symbols:MEE62TMHMM:TMhelix
UniGene:At.29993UniProt:Q9FK63
Coordinates (TAIR10) chr5:-:18575765..18578972
Molecular Weight (calculated) 73896.80 Da
IEP (calculated) 9.97
GRAVY (calculated) -0.12
Length 666 amino acids
Sequence (TAIR10)
(BLAST)
001: MFLKLFLLLS LVSFSHSDSS STVSCPNGTD FHQLTTVFRY VSGFNSSWFS SNCSAVITHV VLPSRKLNGT VSWNPIRNLT RLRVLDLSNN SLDGSLPTWL
101: WSMPGLVSVN LSRNRFGGSI RVIPVNGSVL SAVKELNLSF NRFKHAVNFT GFTNLTTLDL SHNSLGVLPL GLGSLSGLRH LDISRCKING SVKPISGLKS
201: LDYLDLSENS MNGSFPVDFP NLNHLQFLNL SANRFSGSVG FDKYRKFGKS AFLHGGDFVF NDSKIPYHHR IHRLPHRHPP PVRQRNVKTH RTNHTPLVIG
301: LSSSLGALII VIFAAAIILI RRRMKSARTK SRWAISNPTP LDFKMEKSGP FEFGTESGSS WVADIKEPTA APVVMASKPL MNLTFKDLIV ATSHFGTESV
401: ISDGTCGPLY RAVLPGDLHV AIKVLERIRD VDQNDAVTAF EALTRLKHPN LLTLSGYCIA GKEKLILYEF MANGDLHRWL HELPAGETNV EDWSADTWES
501: HVGDSSPEKT NWLIRHRIAI GVARGLAYLH HVGTTHGHLV ATNILLTETL EPRISDFGIN NIARTGDDTN KNNVEFDVYS FGVILFELLT GKQGSDENVK
601: SVRRLVKERR GEEALDSRLR LAAGESVNEM VESLRIGYFC TAETPVKRPT MQQVLGLLKD IRTVSR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)