AT3G14920.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A (InterPro:IPR021102); BEST Arabidopsis thaliana protein match is: Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein (TAIR:AT5G05480.1); Has 261 Blast hits to 247 proteins in 94 species: Archae - 30; Bacteria - 27; Metazoa - 0; Fungi - 111; Plants - 90; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:5018275..5020104 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 68999.80 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 6.80 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.27 | ||||||||||||||||||||||||||||
| Length | 609 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTSSLPPLIF FFTVFFVHSL SAVSDLHETR SRFKPPQFSP LFFSSLPQNV TKSPTRYFEV QKPPVPNLPT AQQPCSYQIL HHDFGYTYAK PPVLSNYTLP 101: SHCSSREFSK IVLEFKSTSQ GRQFDRIFGV WLDGVEILRS CTAEPRPNGI VWSVEKDVTK YHSLLVKNET QILSVYLGNL IDKTYTGVYH VDVIFHFYQS 201: ESNLQDVSGY SSSKADMILP ISRNLPLNDG LWFEIVNSND TKYKEFEIPR NVYRAVLEVY VSFHENDEFW YGNLPNDYVT ANNLSVAGNG PFREVVVSLD 301: GDIAGAVWPF PVVFTGGINP LLWRPITAIG SFDLPSYDIE ITPFLGSLLD GKTHKVGFSV TNALNVWYID ANLHLWLDQE KEIVEGKVLD FSRSSLEISS 401: VSDFKGLNGN FTTKAKRSIT SVGLVKSSHG DIITNANQEF SYENKMVLGK DGNLQIIDQL IQADDRIHAK RASREIYAAK SIKSFPFYLD SDTLEQQNNT 501: YLAVANVSMA FNEERSESDK GLMRTFKSKL ENKQEGQGVM VVKNNLVVSG YGSTQQVYNY VGSDQCYFRN ISSYNYTILY DKVESVCKKK TLKLPPRLEH 601: LPRQHPLLA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)