AT5G37450.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 ASURE: plasma membrane What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat protein kinase family protein | ||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G06840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:14852801..14857098 | ||||||||||||||||
| Molecular Weight (calculated) | 103540.00 Da | ||||||||||||||||
| IEP (calculated) | 7.20 | ||||||||||||||||
| GRAVY (calculated) | -0.10 | ||||||||||||||||
| Length | 935 amino acids | ||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKEMMGVVGI ILVVSSCCLS LLDAQEITHP TDVSALQYVH RKLKDPLNHL QDWKKTDPCA SNWTGVICIP DPSDGFLHVK ELLLSGNQLT GSLPQELGSL 101: SNLLILQIDY NEISGKLPTS LANLKKLKHF HMNNNSITGQ IPPEYSTLTN VLHFLMDNNK LTGNLPPELA QMPSLRILQL DGSNFDGTEI PSSYGSIPNL 201: VKLSLRNCNL EGPIPDLSKS LVLYYLDISS NKLTGEIPKN KFSANITTIN LYNNLLSGSI PSNFSGLPRL QRLQVQNNNL SGEIPVIWEN RILKAEEKLI 301: LDLRNNMFSN VSSVLLNPPS NVTVKLYGNP VCANVNAGKL ADLCGISTLE VESPATSSET ISTGDCKRQS CPVSENYDYV IGSPVACFCA APLGIDLRLR 401: SPSFSDFRPY KVSYMLDVAS PKNLGINPYQ ISIDTFAWQS GPRLFMNMKI FPEYSELNSK FNSTEVQRIV DFFATFTLNT DDSLGPYEII SINTGAYKDG 501: NTHIFYSSLC IKRVFIYVTP VYEVTIIFPK KSGMSIGVSV GIIIGAIAFF LVLSSLALVF FIKRSKRKRK TREVDMEQEH PLPKPPMNME SVKGYNFTEL 601: DSATSSFSDL SQIGRGGYGK VYKGHLPGGL VVAVKRAEQG SLQGQKEFFT EIELLSRLHH RNLVSLLGYC DQKGEQMLVY EYMPNGSLQD ALSARFRQPL 701: SLALRLRIAL GSARGILYLH TEADPPIIHR DIKPSNILLD SKMNPKVADF GISKLIALDG GGVQRDHVTT IVKGTPGYVD PEYYLSHRLT EKSDVYSLGI 801: VFLEILTGMR PISHGRNIVR EVNEACDAGM MMSVIDRSMG QYSEECVKRF MELAIRCCQD NPEARPWMLE IVRELENIYG LIPKEEKPYS SPSVQSSASG 901: MSGFAVASPR SSYTTFSEFT ANQLVSGVIP SIAPR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)