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AT5G15160.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : BANQUO 2
Curator
Summary (TAIR10)
BNQ2 belongs to a family of atypical non-DNA binding basic helix-loop-helix (bHLH) proteins that heterodimerize with and negatively regulate bHLH transcription factors. Directly and negatively regulated by AP3 and PI in petals.Required for appropriate regulation of flowering time.
Computational
Description (TAIR10)
BANQUO 2 (BNQ2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: photomorphogenesis, regulation of timing of transition from vegetative to reproductive phase; LOCATED IN: vacuole; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding family protein (TAIR:AT3G28857.1); Has 97 Blast hits to 97 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 97; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioGrid:16645eggNOG:ENOG410JV97eggNOG:ENOG411064BEMBL:AK118887
EMBL:AL353993EMBL:BT005460EMBL:CP002688EnsemblPlants:AT5G15160
EnsemblPlants:AT5G15160.1entrez:831368Gene3D:4.10.280.10GeneID:831368
Genevisible:Q9LXG5GO:GO:0003700GO:GO:0005634GO:GO:0005773
GO:GO:0006351GO:GO:0009640GO:GO:0009740GO:GO:0040008
GO:GO:0048510Gramene:AT5G15160.1hmmpanther:PTHR12565hmmpanther:PTHR12565:SF172
HOGENOM:HOG000239487InParanoid:Q9LXG5IntAct:Q9LXG5InterPro:IPR011598
iPTMnet:Q9LXG5KEGG:ath:AT5G15160ncoils:CoilOMA:NRRSNKA
PaxDb:Q9LXG5Pfam:PF00010Pfam:Q9LXG5Pfscan:PS50888
PhylomeDB:Q9LXG5PIR:T49951PRIDE:Q9LXG5PRO:PR:Q9LXG5
PROSITE:PS50888ProteinModelPortal:Q9LXG5Proteomes:UP000006548RefSeq:NP_197020.1
STRING:3702.AT5G15160.1SUPFAM:SSF47459TAIR:AT5G15160tair10-symbols:BHLH134
tair10-symbols:BNQ2UniGene:At.1763UniProt:Q9LXG5
Coordinates (TAIR10) chr5:-:4921487..4922553
Molecular Weight (calculated) 10546.30 Da
IEP (calculated) 10.11
GRAVY (calculated) -0.76
Length 94 amino acids
Sequence (TAIR10)
(BLAST)
1: MSSSRRSRQA SSSSRISDDQ ITDLISKLRQ SIPEIRQNRR SNTVSASKVL QETCNYIRNL NKEADDLSDR LTQLLESIDP NSPQAAVIRS LING
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)