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AT3G55150.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : exocyst subunit exo70 family protein H1
Curator
Summary (TAIR10)
A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.
Computational
Description (TAIR10)
exocyst subunit exo70 family protein H1 (EXO70H1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: cytosol, nucleus, exocyst; EXPRESSED IN: sperm cell, root, pollen tube; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H2 (TAIR:AT2G39380.1); Has 814 Blast hits to 800 proteins in 89 species: Archae - 0; Bacteria - 0; Metazoa - 134; Fungi - 34; Plants - 631; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410YIGIeggNOG:KOG2344EMBL:AY074262EMBL:AY096453
EMBL:CP002686EnsemblPlants:AT3G55150EnsemblPlants:AT3G55150.1entrez:824681
GeneID:824681GO:GO:0000145GO:GO:0005634GO:GO:0005829
GO:GO:0006887Gramene:AT3G55150.1hmmpanther:PTHR12542hmmpanther:PTHR12542:SF26
HOGENOM:HOG000115135IntAct:Q8VY27InterPro:IPR004140InterPro:IPR016159
KEGG:ath:AT3G55150KO:K07195OMA:KKSHERIPANTHER:PTHR12542
Pfam:PF03081PhylomeDB:Q8VY27Proteomes:UP000006548Reactome:R-ATH-5620916
RefSeq:NP_191075.2SMR:Q8VY27STRING:3702.AT3G55150.1SUPFAM:SSF74788
TAIR:AT3G55150tair10-symbols:ATEXO70H1tair10-symbols:EXO70H1UniGene:At.35048
UniProt:Q8VY27
Coordinates (TAIR10) chr3:-:20440655..20442565
Molecular Weight (calculated) 71965.80 Da
IEP (calculated) 6.93
GRAVY (calculated) -0.29
Length 636 amino acids
Sequence (TAIR10)
(BLAST)
001: MAKMAKFSFF SSSSPKYHPS SPSSFTSFPA SPLNQNFTQA MMEETVETAD SVIRKWDPNT PSFTKIVSLF NHSRKEAKEF IRCVRDLRRA MHFLVSQDSQ
101: SPKLALAQTL MQIAMARLEK EFFQILSSNR DKLDPESVSG QSSISSNSEF EDVMGSDDDD ESDNEMRKAG ESITQVEKAS AMVMSDLKAI AESMISCGYG
201: KECVKIYKRV RKSIVDEGLS LLGIEIYKGS RFHRTDWVTL EHMIKNWIKA AKIGIATLFR GEKLLCDHVF SASNSTRESC FYEIANEAAT NLFKFPEFVA
301: KEKKSHERIF PLMDLQAAIS DLWQDIEMIF HFDAVAGVKS QALTSLQKLK VSIHSALTDF ESIIQKDTTK ALTPGGGIHK LTRSTMNFIS SLSKYSGVLS
401: EILADHPLPR NTRLLESYVR APISEDEQHN HALSVHFAWL ILVLLCKLDT KAEHYKDVSL SYLFLANNLQ IIIETVGSTP LRNLLGDDWL NKHEDKLCAY
501: AGNYEIAAWS NVFMSLPEEP TDLSPEEAKI YFRRFHTAFE EAYMKQSSRV VPNAKLRDEL KVSIAKKLVP EYREFYRKYL PMLGQERNIE ILVRFKPDNL
601: ENYISDLFHG TPIHASSSFS SSSSSSSWKS LGCVSG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)