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AT1G16060.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : ARIA-interacting double AP2 domain protein
Curator
Summary (TAIR10)
Encodes ADAP, an AP2-domain protein that interacts with ARIA. ADAP is a positive regulator of the ABA response and is also involved in regulating seedling growth.
Computational
Description (TAIR10)
ARIA-interacting double AP2 domain protein (ADAP); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G79700.2); Has 6422 Blast hits to 4728 proteins in 256 species: Archae - 0; Bacteria - 37; Metazoa - 0; Fungi - 0; Plants - 6319; Viruses - 2; Other Eukaryotes - 64 (source: NCBI BLink).
Protein Annotations
BioGrid:23416eggNOG:ENOG410IJUUeggNOG:ENOG410Y9PKEMBL:AC010924
EMBL:AY045915EMBL:AY133880EMBL:CP002684EnsemblPlants:AT1G16060
EnsemblPlants:AT1G16060.1entrez:838176Gene3D:3.30.730.10GeneID:838176
Genevisible:Q94AN4GO:GO:0000981GO:GO:0003677GO:GO:0003700
GO:GO:0005634GO:GO:0006351GO:GO:0006357GO:GO:0007275
GO:GO:0009414GO:GO:0009651GO:GO:0009737GO:GO:0009873
GO:GO:0010187GO:GO:0040008GO:GO:0045723GO:GO:1901959
hmmpanther:PTHR32467hmmpanther:PTHR32467:SF20HOGENOM:HOG000238389InParanoid:Q94AN4
IntAct:Q94AN4InterPro:IPR001471InterPro:IPR016177InterPro:IPR031112
iPTMnet:Q94AN4KEGG:ath:AT1G16060KO:K09285OMA:YSELNDC
PANTHER:PTHR32467PaxDb:Q94AN4Pfam:PF00847Pfam:Q94AN4
Pfscan:PS51032PhylomeDB:Q94AN4PIR:D86295PRIDE:Q94AN4
PRINTS:PR00367PRO:PR:Q94AN4PROSITE:PS51032ProteinModelPortal:Q94AN4
Proteomes:UP000006548RefSeq:NP_563990.1RefSeq:NP_973839.1SMART:SM00380
SMR:Q94AN4STRING:3702.AT1G16060.1SUPFAM:SSF54171TAIR:AT1G16060
tair10-symbols:ADAPUniGene:At.11854UniProt:Q94AN4
Coordinates (TAIR10) chr1:+:5508563..5511609
Molecular Weight (calculated) 39173.30 Da
IEP (calculated) 5.70
GRAVY (calculated) -0.83
Length 345 amino acids
Sequence (TAIR10)
(BLAST)
001: MFIAVEVSPV MEDITRQSKK TSVENETGDD QSATSVVLKA KRKRRSQPRD APPQRSSVHR GVTRHRWTGR YEAHLWDKNS WNETQTKKGR QVYLGAYDEE
101: DAAARAYDLA ALKYWGRDTI LNFPLCNYEE DIKEMESQSK EEYIGSLRRK SSGFSRGVSK YRGVAKHHHN GRWEARIGRV FGNKYLYLGT YATQEEAAIA
201: YDIAAIEYRG LNAVTNFDIS RYLKLPVPEN PIDTANNLLE SPHSDLSPFI KPNHESDLSQ SQSSSEDNDD RKTKLLKSSP LVAEEVIGPS TPPEIAPPRR
301: SFPEDIQTYF GCQNSGKLTA EEDDVIFGDL DSFLTPDFYS ELNDC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)