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AT3G47110.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.820
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Leucine-rich repeat protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: EF-TU receptor (TAIR:AT5G20480.1); Has 201898 Blast hits to 124021 proteins in 4668 species: Archae - 159; Bacteria - 19385; Metazoa - 64482; Fungi - 8819; Plants - 85595; Viruses - 264; Other Eukaryotes - 23194 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G47110-MONOMERBioGrid:9184EC:2.7.11.1eggNOG:COG0515
eggNOG:COG4886eggNOG:ENOG410IH5REMBL:AL133292EMBL:CP002686
EnsemblPlants:AT3G47110EnsemblPlants:AT3G47110.1entrez:823864Gene3D:2.60.120.200
Gene3D:3.80.10.10GeneID:823864Genevisible:Q9SD62GO:GO:0004674
GO:GO:0005524GO:GO:0005886GO:GO:0016021Gramene:AT3G47110.1
hmmpanther:PTHR27000hmmpanther:PTHR27000:SF39HOGENOM:HOG000116551InParanoid:Q9SD62
InterPro:IPR000719InterPro:IPR001611InterPro:IPR003591InterPro:IPR008271
InterPro:IPR011009InterPro:IPR013210InterPro:IPR013320InterPro:IPR017441
InterPro:IPR032675KEGG:ath:AT3G47110ncoils:CoilOMA:ILYMGIN
PaxDb:Q9SD62Pfam:PF00069Pfam:PF08263Pfam:PF13855
Pfam:Q9SD62Pfscan:PS50011PhylomeDB:Q9SD62PIR:T45647
PRIDE:Q9SD62PRO:PR:Q9SD62PROSITE:PS00107PROSITE:PS00108
PROSITE:PS50011ProteinModelPortal:Q9SD62Proteomes:UP000006548RefSeq:NP_190295.1
scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMART:SM00369
SMR:Q9SD62STRING:3702.AT3G47110.1SUPFAM:SSF52047SUPFAM:SSF52058
SUPFAM:SSF56112TAIR:AT3G47110TMHMM:TMhelixUniGene:At.53812
UniProt:Q9SD62
Coordinates (TAIR10) chr3:-:17347103..17350296
Molecular Weight (calculated) 111545.00 Da
IEP (calculated) 7.32
GRAVY (calculated) 0.20
Length 1025 amino acids
Sequence (TAIR10)
(BLAST)
0001: MGVPCIVMRL ILVSALLVSV SLEHSDMVCA QTIRLTEETD KQALLEFKSQ VSETSRVVLG SWNDSLPLCS WTGVKCGLKH RRVTGVDLGG LKLTGVVSPF
0101: VGNLSFLRSL NLADNFFHGA IPSEVGNLFR LQYLNMSNNL FGGVIPVVLS NCSSLSTLDL SSNHLEQGVP LEFGSLSKLV LLSLGRNNLT GKFPASLGNL
0201: TSLQMLDFIY NQIEGEIPGD IARLKQMIFF RIALNKFNGV FPPPIYNLSS LIFLSITGNS FSGTLRPDFG SLLPNLQILY MGINSFTGTI PETLSNISSL
0301: RQLDIPSNHL TGKIPLSFGR LQNLLLLGLN NNSLGNYSSG DLDFLGALTN CSQLQYLNVG FNKLGGQLPV FIANLSTQLT ELSLGGNLIS GSIPHGIGNL
0401: VSLQTLDLGE NLLTGKLPPS LGELSELRKV LLYSNGLSGE IPSSLGNISG LTYLYLLNNS FEGSIPSSLG SCSYLLDLNL GTNKLNGSIP HELMELPSLV
0501: VLNVSFNLLV GPLRQDIGKL KFLLALDVSY NKLSGQIPQT LANCLSLEFL LLQGNSFVGP IPDIRGLTGL RFLDLSKNNL SGTIPEYMAN FSKLQNLNLS
0601: LNNFDGAVPT EGVFRNTSAM SVFGNINLCG GIPSLQLQPC SVELPRRHSS VRKIITICVS AVMAALLLLC LCVVYLCWYK LRVKSVRANN NENDRSFSPV
0701: KSFYEKISYD ELYKTTGGFS SSNLIGSGNF GAVFKGFLGS KNKAVAIKVL NLCKRGAAKS FIAECEALGG IRHRNLVKLV TICSSSDFEG NDFRALVYEF
0801: MPNGNLDMWL HPDEIEETGN PSRTLGLFAR LNIAIDVASA LVYLHTYCHN PIAHCDIKPS NILLDKDLTA HVSDFGLAQL LLKFDRDTFH IQFSSAGVRG
0901: TIGYAAPEYG MGGHPSIMGD VYSFGIVLLE IFTGKRPTNK LFVDGLTLHS FTKSALQKRQ ALDITDETIL RGAYAQHFNM VECLTLVFRV GVSCSEESPV
1001: NRISMAEAIS KLVSIRESFF RDEET
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)