AT2G40850.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : phosphoinositide 4-kinase gamma 1 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
phosphoinositide 4-kinase gamma 1 (PI4K GAMMA 1); FUNCTIONS IN: inositol or phosphatidylinositol kinase activity, phosphotransferase activity, alcohol group as acceptor; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: tapetum, microspore; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G56600.2); Has 555 Blast hits to 545 proteins in 145 species: Archae - 0; Bacteria - 2; Metazoa - 130; Fungi - 70; Plants - 264; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:17051575..17053260 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 61369.10 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.61 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.21 | ||||||||||||||||||||||||||||||||||||||||
| Length | 561 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNCLATTIII TCKPTLISDM AVAIDPFSDK FPYFNRSSQR CRLQSLTNLD FNFLAQSFNH TFEDDNIHRS VSSPCFSIAA SANMEEDLKA TTAPRIEILG 101: GQRVPTVRAL VAEVTMAMVS GAQPLLLPSG MGGAYLLQTG KGHNIAVAKP VDEEPLAFNN PKKSGNLMLG QPGMKHSIPV GETGIRELAA YLLDYQGFSG 201: VPPTALVSIS HVPFHVSDAF SFSSMPYKVA SLQRFVGHDF DAGELGPGSF TATSVHRIGI LDVRLLNLDR HAGNMLVKRC DKKEAYNRLG TAELVPIDHG 301: LCLPECLDDP YFEWLNWPQA LVPFSDTELD YISNLDPFKD AELLRTELHS LPESAIRVLV VCTVFLKQAA AAGLCLAEIG EKMTRDFSKG EESFSLLETL 401: CTKAKASVFG KTSEDSDYSH EGNEVNTELQ CGMFKFDGGD TPCEAEISEV FHVSKPPLVP RGPRANTIPN DVTASMSSSQ NQRITHQEKS AKEKKRGGKQ 501: ERCTVRSKSP PISPNHDESK GVSFVDMTTV EWDTFLQSFQ TLLQDALSKG STPRLGCSCE I |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)