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AT4G03230.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : S-locus lectin protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
S-locus lectin protein kinase family protein; FUNCTIONS IN: sugar binding, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine/threonine-protein kinase domain (InterPro:IPR002290), EGF-like, type 3 (InterPro:IPR000742), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G11340.1); Has 120947 Blast hits to 117758 proteins in 4568 species: Archae - 89; Bacteria - 13334; Metazoa - 43594; Fungi - 9240; Plants - 36995; Viruses - 386; Other Eukaryotes - 17309 (source: NCBI BLink).
Protein Annotations
EnsemblPlants:AT4G03230EnsemblPlants:AT4G03230.1entrez:828018hmmpanther:PTHR27002
hmmpanther:PTHR27002:SF102KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1Pfam:PF00954
Pfam:PF01453Pfam:PF07714Pfam:PF08276Pfam:PF11883
Pfscan:PS50011Pfscan:PS50026Pfscan:PS50927Pfscan:PS50948
scanprosite:PS00108
Coordinates (TAIR10) chr4:-:1419278..1422828
Molecular Weight (calculated) 113561.00 Da
IEP (calculated) 6.03
GRAVY (calculated) -0.28
Length 1010 amino acids
Sequence (TAIR10)
(BLAST)
0001: MILSVFFYMF LLHIRRLDCF VAVQDSKTLF KGSTLINDSH GETLVSAGQR FELGFFTPNG SSDERRYLGI WFYNLHPLTV VWVANRESPV LDRSCIFTIS
0101: KDGNLEVIDS KGRVYWDTGV KPSSVSAERM VKLMDNGNLV LISDGNEANV VWQSFQNPTD TFLPGMRMDE NMTLSSWRSF NDPSHGNFTF QMDQEEDKQF
0201: IIWKRSMRYW KSGISGKFIG SDEMPYAISY FLSNFTETVT VHNASVPPLF TSLYTNTRFT MSSSGQAQYF RLDGERFWAQ IWAEPRDECS VYNACGNFGS
0301: CNSKNEEMCK CLPGFRPNFL EKWVKGDFSG GCSRESRICG KDGVVVGDMF LNLSVVEVGS PDSQFDAHNE KECRAECLNN CQCQAYSYEE VDILQSNTKC
0401: WIWLEDLNNL KEGYLGSRNV FIRVAVPDIE STSRDCVTCG TNIIPYPLST APGCGDSNYL SFNCNMSTGQ VIFKGSNSSY NITSINPDTR RFLIKIKDVV
0501: VNCTTVNQIS RLSELKLSSP FHLTGKCNAD TVTGGTEVEI RWDPPLEPTC SLSADCKDWP NSSCSKSGEG KKQCFCNHDF KWNGFNLNCT QERGRGRYGE
0601: AKTPVVLIIV VTFTSAAILV VLSSTASYVF LQRRKVNKEL GSIPRGVHLC DSERHIKELI ESGRFKQDDS QGIDVPSFEL ETILYATSNF SNANKLGQGG
0701: FGPVYKGMFP GDQEIAVKRL SRCSGQGLEE FKNEVVLIAK LQHRNLVRLL GYCVAGEEKL LLYEYMPHKS LDFFIFDRKL CQRLDWKMRC NIILGIARGL
0801: LYLHQDSRLR IIHRDLKTSN ILLDEEMNPK ISDFGLARIF GGSETSANTN RVVGTYGYMS PEYALEGLFS FKSDVFSFGV VVIETISGKR NTGFHEPEKS
0901: LSLLGHAWDL WKAERGIELL DQALQESCET EGFLKCLNVG LLCVQEDPND RPTMSNVVFM LGSSEAATLP TPKQPAFVLR RCPSSSKASS STKPETCSEN
1001: ELTITLEDGR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)