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AT5G40910.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
plasma membrane 0.980
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Disease resistance protein (TIR-NBS-LRR class) family
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G41550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:COG4886eggNOG:ENOG410IGA8EMBL:AB011477EMBL:CP002688
EnsemblPlants:AT5G40910EnsemblPlants:AT5G40910.1entrez:834092Gene3D:3.40.50.10140
Gene3D:3.40.50.300Gene3D:3.80.10.10GeneID:834092GO:GO:0005524
GO:GO:0007165GO:GO:0016021GO:GO:0043531Gramene:AT5G40910.1
hmmpanther:PTHR11017hmmpanther:PTHR11017:SF20HOGENOM:HOG000064702InterPro:IPR000157
InterPro:IPR002182InterPro:IPR003593InterPro:IPR011713InterPro:IPR011991
InterPro:IPR027417InterPro:IPR032675KEGG:ath:AT5G40910OMA:HVPESVT
Pfam:PF00931Pfam:PF01582Pfam:PF07725Pfscan:PS50104
PhylomeDB:Q9FKR7PROSITE:PS50104Proteomes:UP000006548RefSeq:NP_198907.1
SMART:SM00255SMART:SM00382SMR:Q9FKR7STRING:3702.AT5G40910.1
SUPFAM:SSF46785SUPFAM:SSF52058SUPFAM:SSF52200SUPFAM:SSF52540
TAIR:AT5G40910TMHMM:TMhelixUniGene:At.43039UniGene:At.75348
UniProt:Q9FKR7
Coordinates (TAIR10) chr5:+:16395507..16399129
Molecular Weight (calculated) 124321.00 Da
IEP (calculated) 7.16
GRAVY (calculated) -0.07
Length 1104 amino acids
Sequence (TAIR10)
(BLAST)
0001: MAFSSPSDFK RYHVFSSFHG PDVRSGFLSH LHNHFESKGI TPFKDQEIER GHTIGPELIQ AIRESRVSIV VLSEKYASSC WCLDELVEIL KCKEASGQVV
0101: MTIFYKVDPS DVRKQRGDFG STFKKTCEGK TWIVKQRWIK ALEYIATVAG EHSLSWANEA ELIQKIATDV SNKLNLTPSR DFEGMVGLEA HLTKLDSFLC
0201: LESDDVKMIG IWGPAGIGKT TIARALFNQL STGFRLSCFM GTIDVNDYDS KLCLQNKLLS KILNQKDMKI HHLGAIEEWL HNQRVLIVLD DVDDLEQLEV
0301: LAKESSWFGH GSRIIVSLND RKILKAHGIN DIYDVDFPSE EEALEILCLS AFKQNSPQDG FEEVAKRVVE LCGKLPLGLR VVGSSFYGES EDEWRIQLYG
0401: IETNLDRKIE NVLRVGYDKL SERHQSLFLH IACFFNHKSV DYVTTMLADS TLDVENGLKT LAAKSLVSTN GWITMHCLLQ QLGRQVVVQQ GDPGKRQFLV
0501: EAKEIRDVLA NETGTESVIG ISFDISKIET LSISKRAFNR MRNLKFLNFY NGSVSLLEDM EYLPRLRLLY WGSYPRKSLP LTFKPECLVE LYMGFSKLEK
0601: LWGGIQPLTN LKKINLGYSS NLKEIPNLSK ATNLKTLTLT GCESLVEIPS SIWNLQKLEM LYASGCIKLQ VIPTNINLAS LEEVNMSNCS RLRSFPDISS
0701: NIKRLYVAGT MIKEFPASIV GHWCRLDFLQ IGSRSLKRLT HVPESVTHLD LRNSDIKMIP DCVIGLPHLV SLLVENCTKL VSIQGHSPSL VTLFADHCIS
0801: LKSVCCSFHG PISKLMFYNC LKLDKESKRG IIQQSGNKSI CLPGKEIPAE FTHQTIGNLI TISLAPGCEE AYSTFSRFKA CLLLSPIKNF AFNKINCFLR
0901: SKGVEISRTT ESIYPFVSGG SLSEHLFIFC GDLFPEENRS LMDVTPNEIL FDFSSSDVEI VECGVKIFLS SGIEVGYCET GGNRNHHIDG EAEAFKVTQV
1001: ENSKHTGHWS WLRKLRLGKK KMKNNKTELS SRPVSGFSDL TRGIFIRYQE PEAVELTKDE RITDLSSLLC IGSLVVCFFL SVFFGQPLVV SVLLLFSCFF
1101: LQMQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)