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AT1G63880.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Disease resistance protein (TIR-NBS-LRR class) family
Curator
Summary (TAIR10)
Encodes a TIR-NBS-LRR class of disease resistance protein effective against Leptosphaeria maculans.
Computational
Description (TAIR10)
Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: defense response to fungus, defense response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT1G63870.1); Has 17518 Blast hits to 14440 proteins in 610 species: Archae - 16; Bacteria - 959; Metazoa - 689; Fungi - 60; Plants - 15378; Viruses - 8; Other Eukaryotes - 408 (source: NCBI BLink).
Protein Annotations
eggNOG:COG4886eggNOG:ENOG410IGA8EMBL:AC010852EMBL:AK119065
EMBL:CP002684EnsemblPlants:AT1G63880EnsemblPlants:AT1G63880.1entrez:842692
Gene3D:3.40.50.10140Gene3D:3.40.50.300Gene3D:3.80.10.10GeneID:842692
Genevisible:Q9CAK1GO:GO:0005524GO:GO:0007165GO:GO:0043531
GO:GO:0050832Gramene:AT1G63880.1hmmpanther:PTHR11017hmmpanther:PTHR11017:SF20
InParanoid:Q9CAK1InterPro:IPR000157InterPro:IPR002182InterPro:IPR003593
InterPro:IPR011713InterPro:IPR011991InterPro:IPR027417InterPro:IPR032675
KEGG:ath:AT1G63880OMA:DAREICHPaxDb:Q9CAK1Pfam:PF00931
Pfam:PF01582Pfam:PF07725Pfscan:PS50104PhylomeDB:Q9CAK1
PIR:H96663PRIDE:Q9CAK1PRO:PR:Q9CAK1PROSITE:PS50104
ProteinModelPortal:Q9CAK1Proteomes:UP000006548RefSeq:NP_176572.1SMART:SM00255
SMART:SM00382SMR:Q9CAK1STRING:3702.AT1G63880.1SUPFAM:SSF46785
SUPFAM:SSF52058SUPFAM:SSF52200SUPFAM:SSF52540TAIR:AT1G63880
UniGene:At.28151UniProt:Q9CAK1
Coordinates (TAIR10) chr1:-:23712514..23716047
Molecular Weight (calculated) 115421.00 Da
IEP (calculated) 6.76
GRAVY (calculated) -0.21
Length 1017 amino acids
Sequence (TAIR10)
(BLAST)
0001: MASPSSFSSQ NYKFNVFASF HGPDVRKTLL SHIRLQFNRN GITMFDDQKI VRSATIGPSL VEAIKESRIS IVILSKKYAS SSWCLDELVE ILECKKAMGQ
0101: IVMTIFYGVD PSDVRKQIGK FGIAFNETCA RKTEEERQKW SKALNQVSNI AGEDFLRWDN EAIMIEKIAR DVLDKLNATP SRDFDGMVGI EAHLREIKSL
0201: LDLDNVEVKI VAIAGPAGIG KTTIARALYG LLSKRFQLSC FVDNLRGSYH SGFDEYGFKL HLQEQFLSKV LNQSGMRICH LGAIKENLSD QRVLIILDDV
0301: NKLKQLEALA NETTWFGPGS RIVVTTENKE LLQQHGINNT YHVGFPSDED ALKILCSYAF KQTSPRHGFE ELSESVTKLC GKLPLGLCVV GSSLRGKKED
0401: EWEDVVTRLE TILDQDIEDV LRVGYESLDE NAQTLFLHIA IFFNKEDGDL VKTMFAESDL DVKYGLKILE NRSLIKMKIF SNGDTKIVMH RLLQQMGKRA
0501: IQKQEPWERQ ILIDAREICH VLEHAKGTGW NVHGMSFDIS RISEVSIRKK AFKRMPNLQF LKVYKSKDDG NNRMHVPEEM DFPCLLRLLD WKAYPSKSLP
0601: PTFNPEHLVE LNMHSSQLEY LWQGTQPLKN LKKMDLSQSK NLKQLPDLSN ATNLEYLYLM GCESLIEIPS SISHLHKLEM LATVGCINLE VIPAHMNLES
0701: LQTVYLGGCS RLRNIPVMST NIRYLFITNT AVEGVPLCPG LKTLDVSGSR NFKGLLTHLP TSLTTLNLCY TDIERIPDCF KSLHQLKGVN LRGCRRLASL
0801: PELPRSLLTL VADDCESLET VFCPLNTLKA SFSFANCFKL DREARRAIIQ QSFFMGKAVL PGREVPAVFD HRAKGYSLTI RPDGNPYTSF VFCVVVSRNQ
0901: KSDKTIPPSL LWRRIIAQDE GYPVEVWNRI GDVFKYRTEH LLIFHFDFLE FDNRDIVFEF SSESHDFDII ECGAKVLAEK SIKESYESGS DQAFEDDVVF
1001: EPSKAFGDEK YGDCCIL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)