AT3G17630.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cation/H+ exchanger 19 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of Putative Na+/H+ antiporter family | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cation/H+ exchanger 19 (CHX19); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 18 (TAIR:AT5G41610.1); Has 10353 Blast hits to 10313 proteins in 2156 species: Archae - 388; Bacteria - 8084; Metazoa - 59; Fungi - 214; Plants - 674; Viruses - 0; Other Eukaryotes - 934 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:6029201..6031773 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 86920.40 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.66 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.37 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 800 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MASTNVTGQC PGPMKATSNG AFQNESPLDF ALPLIILQIV LVVVFTRLLA YFLKPLKQPR VIAEIIGGIL LGPSALGRSK AYLDTIFPKK SLTVLDTLAN 101: IGLLFFLFLV GLELDFAAIK KTGKKSLLIA IAGISLPFIV GVGTSFVLSA TISKGVDQLP FIVFMGVALS ITAFPVLARI LAELKLLTTD IGRMAMSAAG 201: VNDVAAWILL ALAIALSGDG TSPLVSVWVL LCGTGFVIFA VVAIKPLLAY MARRCPEGEP VKELYVCVTL TVVLAASFVT DTIGIHALFG AFVVGIVAPK 301: EGPFCRILTE KIEDLVSGLL LPLYFAASGL KTDVTTIRGA QSWGLLVLVI LTTCFGKIVG TVGSSMLCKV PFREAVTLGF LMNTKGLVEL IVLNIGKDRK 401: VLNDQAFAIL VLMALFTTFI TTPIVMLIYK PARKGAPYKH RTIQRKDHDS ELRILACFHS TRNIPTLINL IESSRGTGKK GRLCVYAMHL MELSERSSAI 501: AMVHKARNNG LPIWNKIERS TDQMVIAFEA YQHLRAVAVR PMTAISGLSS IHEDICTSAH QKRVAMILLP FHKHQRMDGA MESIGHRFHE VNQRVLQRAP 601: CSVGILVDRG LGGTSQVVAS EVAYKVVIPF FGGLDDREAL AYGMKMVEHP GITLTVYKFV AARGTLKRFE KSEHDEKEKK EKETDEEFVR ELMNDPRGNE 701: SLAYEERVVE SKDDIIATLK SMSKCNLFVV GRNAAVASLV KSTDCPELGP VGRLLSSSEF STTASVLVVQ GYDPAADTRP LVEEDAEYDQ SSRDISDLTA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)