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AT1G78955.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.720
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : camelliol C synthase 1
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
camelliol C synthase 1 (CAMS1); CONTAINS InterPro DOMAIN/s: Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases family protein (TAIR:AT1G78950.1); Has 2110 Blast hits to 1948 proteins in 563 species: Archae - 2; Bacteria - 929; Metazoa - 122; Fungi - 243; Plants - 611; Viruses - 0; Other Eukaryotes - 203 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G78955-MONOMERBioCyc:MetaCyc:AT1G78955-MONOMERBRENDA:5.4.99.38EC:5.4.99.38
eggNOG:COG1657eggNOG:KOG0497EMBL:AC002986EMBL:CP002684
EnsemblPlants:AT1G78955EnsemblPlants:AT1G78955.1entrez:844235Gene3D:1.50.10.20
GeneID:844235GO:GO:0042300GO:GO:0090438Gramene:AT1G78955.1
gramene_pathway:5.4.99.-gramene_pathway:PWY-5377HOGENOM:HOG000234317InParanoid:P0C8Y0
InterPro:IPR008930InterPro:IPR018333InterPro:IPR032696InterPro:IPR032697
KEGG:ath:AT1G78955KO:K15822OMA:KSMHRHIPaxDb:P0C8Y0
Pfam:P0C8Y0Pfam:PF13243Pfam:PF13249PhylomeDB:P0C8Y0
PIR:T01060PRIDE:P0C8Y0PRO:PR:P0C8Y0ProteinModelPortal:P0C8Y0
Proteomes:UP000006548RefSeq:NP_683508.1SMR:P0C8Y0STRING:3702.AT1G78955.1
SUPFAM:SSF48239TAIR:AT1G78955tair10-symbols:CAMS1TIGRfam:TIGR01787
TIGRFAMs:TIGR01787UniGene:At.52564UniProt:P0C8Y0
Coordinates (TAIR10) chr1:-:29689153..29694255
Molecular Weight (calculated) 88160.60 Da
IEP (calculated) 6.88
GRAVY (calculated) -0.30
Length 769 amino acids
Sequence (TAIR10)
(BLAST)
001: MWKLKIANGN KEEPYLFSTN NFLGRQTWEF DPDAGTVEEL AAVEEARRKF YDDRFRVKAS SDLIWRMQFL KEKKFEQVIP PAKVEDANNI TSEIATNALR
101: KGVNFLSALQ ASDGHWPAEN AGPLFFLPPL VFCLYVTGHL HEIFTQDHRR EVLRYIYCHQ NEDGGWGLHI EGNSTMFCTT LNYICMRILG EGPNGGPGNA
201: CKRARDWILD HGGATYIPSW GKTWLSILGV FDWSGSNPMP PEFWILPSFL PIHPAKMWCY CRLVYMPMSY LYGKRFVGPI SPLILQLREE IYLQPYAKIN
301: WNRARHLCAK EDAYCPHPQI QDVIWNCLYI FTEPFLACWP FNKLLREKAL GVAMKHIHYE DENSRYITIG CVEKALCMLA CWVEDPNGIH FKKHLLRISD
401: YLWIAEDGMK MQSFGSQLWD SGFALQALVA SNLVNEIPDV LRRGYDFLKN SQVRENPSGD FTNMYRHISK GSWTFSDRDH GWQASDCTAE SFKCCLLLSM
501: IPPDIVGPKM DPEQLYEAVT ILLSLQSKNG GVTAWEPARG QEWLELLNPT EVFADIVVEH EYNECTSSAI QALILFKQLY PNHRTEEINT SIKKAVQYIE
601: SIQMLDGSWY GSWGVCFTYS TWFGLGGLAA AGKTYNNCLA MRKGVHFLLT TQKDNGGWGE SYLSCPKKRY IPSEGERSNL VQTSWAMMGL LHAGQAERDP
701: SPLHRAAKLL INSQLENGDF PQQEITGAFM KNCLLHYAAY RNIFPVWALA EYRRRVPLPY EKPSTERRS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)