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AT2G23420.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.937
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25641898 (2015): plasma membrane
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : nicotinate phosphoribosyltransferase 2
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
nicotinate phosphoribosyltransferase 2 (NAPRT2); FUNCTIONS IN: nicotinate phosphoribosyltransferase activity; INVOLVED IN: pyridine nucleotide biosynthetic process, nicotinate nucleotide salvage; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nicotinate phosphoribosyltransferase-related (InterPro:IPR007229), Nicotinate phosphoribosyltransferase putative (InterPro:IPR006405), Nicotinate phosphoribosyltransferase-like (InterPro:IPR015977); BEST Arabidopsis thaliana protein match is: nicotinate phosphoribosyltransferase 1 (TAIR:AT4G36940.1); Has 2998 Blast hits to 2961 proteins in 1361 species: Archae - 146; Bacteria - 2405; Metazoa - 184; Fungi - 41; Plants - 69; Viruses - 0; Other Eukaryotes - 153 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G23420-MONOMEREC:6.3.4.21eggNOG:COG1488eggNOG:KOG2511
EMBL:AC003040EMBL:BT001932EMBL:CP002685EnsemblPlants:AT2G23420
EnsemblPlants:AT2G23420.1entrez:816874GeneID:816874Genevisible:Q84WV8
GO:GO:0004514GO:GO:0004516GO:GO:0009435GO:GO:0016874
GO:GO:0019358Gramene:AT2G23420.1gramene_pathway:2.4.2.11gramene_pathway:PWY-5381
hmmpanther:PTHR11098hmmpanther:PTHR11098:SF17HOGENOM:HOG000001111IntAct:Q84WV8
InterPro:IPR002638InterPro:IPR006405InterPro:IPR007229KEGG:00760+6.3.4.21
KEGG:ath:AT2G23420KO:K00763OMA:DNNTHTAPANTHER:PTHR11098
PaxDb:Q84WV8Pfam:PF04095Pfam:Q84WV8PhylomeDB:Q84WV8
PIR:T01131PIRSF:PIRSF000484PRIDE:Q84WV8PRO:PR:Q84WV8
ProteinModelPortal:Q84WV8Proteomes:UP000006548Reactome:R-ATH-197264RefSeq:NP_179923.2
SMR:Q84WV8STRING:3702.AT2G23420.1SUPFAM:SSF51690SUPFAM:SSF54675
TAIR:AT2G23420tair10-symbols:NAPRT2TIGRfam:TIGR01513TIGRFAMs:TIGR01513
UniGene:At.24789UniPathway:UPA00253UniProt:Q84WV8
Coordinates (TAIR10) chr2:+:9971819..9974909
Molecular Weight (calculated) 62276.60 Da
IEP (calculated) 6.09
GRAVY (calculated) -0.19
Length 557 amino acids
Sequence (TAIR10)
(BLAST)
001: MEPKENGSEL GQKIIDGPTN PMVTPLLNDL YQFTMAYAYW KAGKHNERSV FDLYFRKNPF GGEYTVFAGL EECVKFLANF KLTDEEIDFV QECLPGSEEA
101: FCDYLRGLDC SDVEVYAIPE GSVVFPKVPL MRVEGPVGVV QLLETPFLNL VNFASLVATN AARHRFVAGK SKSLLEFGAR RAQGPDGAIS ASKYCYLGGF
201: DATSNVAAGK LFGIPLRGTH SHAYVSSFMS TDEIVDKVLR SADGKTTCED FVSHVQTWLK KIQYSPSLSG IFSETNQSEL AAFTSYALAF PKTFLALVDT
301: YDVMKSGIPN FCAVALALND FGYKALGIRL DSGDLAYLSR EARNFFCTVE RELKVPGFGK MVVTASNDLN EETIDALNKQ GHEVDAFGIG TYLVTCYSQA
401: ALGCVFKLVE INNQPRIKLS EDVTKVSIPC KKRSYRLYGK EGYPLVDIMT GENEPPPKVG ERLLCRHPFN ESKRAYVVPQ RVEELLKCYW RGSADEAREV
501: LPPLKEIRDR CIKQLENMRP DHMRRLNPTP YKVSVSAKLY DFIHFLWLNE APVGELQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)