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AT3G05840.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.991
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
encodes a SHAGGY-like kinase involved in meristem organization.
Computational
Description (TAIR10)
ATSK12; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity; INVOLVED IN: meristem structural organization, gynoecium development, phosphorylation; LOCATED IN: cytosol; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: shaggy-related kinase 11 (TAIR:AT5G26751.1); Has 106116 Blast hits to 104748 proteins in 3681 species: Archae - 81; Bacteria - 10864; Metazoa - 38225; Fungi - 11828; Plants - 26475; Viruses - 386; Other Eukaryotes - 18257 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G05840-MONOMERBioCyc:ARA:GQT-420-MONOMERBioGrid:5088BRENDA:2.7.11.26
EC:2.7.11.1eggNOG:COG0515eggNOG:KOG0658EMBL:AC012393
EMBL:AY062713EMBL:AY085752EMBL:AY093347EMBL:CP002686
EMBL:X75431EMBL:Y12710EnsemblPlants:AT3G05840EnsemblPlants:AT3G05840.1
EnsemblPlants:AT3G05840.2entrez:819753ExpressionAtlas:P43289GeneID:819753
Genevisible:P43289GO:GO:0004674GO:GO:0005524GO:GO:0005829
GO:GO:0009933GO:GO:0046777Gramene:AT3G05840.1Gramene:AT3G05840.2
hmmpanther:PTHR24057hmmpanther:PTHR24057:SF10HOGENOM:HOG000233017InParanoid:P43289
IntAct:P43289InterPro:IPR000719InterPro:IPR008271InterPro:IPR011009
InterPro:IPR017441iPTMnet:P43289KEGG:ath:AT3G05840OMA:DSLVHPF
PaxDb:P43289Pfam:P43289Pfam:PF00069Pfscan:PS50011
PhylomeDB:P43289PhylomeDB:Q0WUV3PIR:S41597PRO:PR:P43289
PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:P43289
Proteomes:UP000006548Reactome:R-ATH-3371453RefSeq:NP_187235.1RefSeq:NP_850520.1
scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMR:P43289
STRING:3702.AT3G05840.1SUPFAM:SSF56112TAIR:AT3G05840tair10-symbols:ATSK12
UniGene:At.132UniGene:At.20895UniProt:P43289UniProt:Q0WUV3
Coordinates (TAIR10) chr3:+:1740793..1742927
Molecular Weight (calculated) 46589.70 Da
IEP (calculated) 8.40
GRAVY (calculated) -0.25
Length 409 amino acids
Sequence (TAIR10)
(BLAST)
001: MASVGIEPSA AVRESTGNVT DADRLPEEMK DMKIQDDKEM EATIVNGNVT ETGHIIVTTI GGRNGQPKQT ISYMAERVVG HGSFGVVFQA KCLETGETVA
101: IKKVLQDRRY KNRELQTMRL LDHPNVVSLK HCFFSTTEKD ELYLNLVLEY VPETVHRVIK HYNKLNQRMP LVYVKLYTYQ IFRSLSYIHR CIGVCHRDIK
201: PQNLLVNPHT HQVKLCDFGS AKVLVKGEPN ISYICSRYYR APELIFGATE YTTAIDVWSA GCVLAELLLG QPLFPGESGV DQLVEIIKVL GTPTREEIKC
301: MNPNYTEFKF PQIKAHPWHK IFHKRMPPEA VDLVSRLLQY SPNLRCAALD SLVHPFFDEL RDPNARLPNG RFLPPLFNFK PHELKGVPVE MVAKLVPEHA
401: RKQCPWLSL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)