AT1G69460.1::SUBA5

AT1G69460.1

Subcellular Consensus
(Prediction and Experimental)

min:

:max

SUBAcon:
endoplasmic reticulum 1.000
What is SUBAcon?

Predictors

External Curations

AmiGO : endoplasmic reticulum 16618929
SwissProt : plasma membrane 16381842
TAIR : endoplasmic reticulum 16618929

Experimental Localisations and PPI

FP	MS/MS	PPI
	PMID:31520498 (2020): mitochondrion PMID:25900983 (2015): Golgi PMID:25900983 (2015): Golgi trans-Golgi network PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body PMID:22923678 (2012): endoplasmic reticulum PMID:21988472 (2012): plant-type vacuole plant-type vacuole membrane PMID:19334764 (2009): plasma membrane PMID:16618929 (2006): endoplasmic reticulum	PMID:24833385 (2014): AT3G12180.1:None: PMID:24833385 (2014): AT3G26280.1:None: PMID:24833385 (2014): AT4G29330.1:None: PMID:24833385 (2014): AT1G63110.1:None: PMID:24833385 (2014): AT1G14020.1:None: PMID:24833385 (2014): AT3G66654.1:None: PMID:24833385 (2014): AT4G20790.1:None: PMID:24833385 (2014): AT5G59650.1:None: PMID:24833385 (2014): AT4G14455.1:None: PMID:24833385 (2014): AT1G14990.1:None: PMID:24833385 (2014): AT3G25805.1:None: PMID:24833385 (2014): AT5G21920.1:None: PMID:24833385 (2014): AT4G23400.1:None:

SUBAcon links
AGI-AGI relationships

Coexpression	PPI
AT1G07960.1 endoplasmic reticulum [6.98] AT3G07680.1 endoplasmic reticulum [5.71] AT1G22300.1 cytosol [5.34] AT2G29960.1 endoplasmic reticulum [5.32] AT3G18430.1 plasma membrane [5.26] AT1G61790.1 endoplasmic reticulum [5.24] AT1G56330.1 cytosol, endoplasmic reticulum [5.2] AT4G19045.1 cytosol [5.14] AT2G47320.1 golgi [5.1] AT4G34960.1 golgi [5.08]	AT3G12180.1 endoplasmic reticulum AT4G29330.1 endoplasmic reticulum AT1G14020.1 golgi AT3G66654.1 golgi AT4G14455.1 golgi AT1G14990.1 mitochondrion AT4G20790.1 plasma membrane AT4G23400.1 plasma membrane AT5G59650.1 plasma membrane AT3G26280.1 endoplasmic reticulum, plasma membrane AT3G25805.1 plastid AT5G21920.1 plastid AT1G63110.1 vacuole

Description (TAIR10)

protein_coding : emp24/gp25L/p24 family/GOLD family protein

Curator
Summary (TAIR10)

Computational
Description (TAIR10)

emp24/gp25L/p24 family/GOLD family protein; FUNCTIONS IN: protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, transport; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: guard cell, callus; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038), emp24/gp25L/p24 (InterPro:IPR000348); BEST Arabidopsis thaliana protein match is: emp24/gp25L/p24 family/GOLD family protein (TAIR:AT1G26690.1); Has 1501 Blast hits to 1499 proteins in 239 species: Archae - 0; Bacteria - 0; Metazoa - 645; Fungi - 467; Plants - 241; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink).

Protein Annotations

BioGrid:28499	eggNOG:ENOG410XTBQ	eggNOG:KOG1691	EMBL:AC073178
EMBL:AF083711	EMBL:AY072343	EMBL:AY114598	EMBL:CP002684
EnsemblPlants:AT1G69460	EnsemblPlants:AT1G69460.1	entrez:843278	GeneID:843278
GO:GO:0005783	GO:GO:0005789	GO:GO:0015031	GO:GO:0016021
GO:GO:0016192	GO:GO:0032580	GO:GO:0033116	Gramene:AT1G69460.1
hmmpanther:PTHR22811	hmmpanther:PTHR22811:SF47	HOGENOM:HOG000160227	InParanoid:Q8VY92
InterPro:IPR009038	InterPro:IPR015720	KEGG:ath:AT1G69460	OMA:STNTKMA
PANTHER:PTHR22811	PaxDb:Q8VY92	Pfam:PF01105	Pfam:Q8VY92
Pfscan:PS50866	PhylomeDB:Q8VY92	PRIDE:Q8VY92	PRO:PR:Q8VY92
PROSITE:PS50866	Proteomes:UP000006548	Reactome:R-ATH-6807878	RefSeq:NP_177105.2
SMART:SM01190	STRING:3702.AT1G69460.1	TAIR:AT1G69460	TMHMM:TMhelix
UniGene:At.28007	UniProt:Q8VY92

Coordinates (TAIR10)

chr1:-:26112054..26113160

Molecular Weight (calculated)

24415.20 Da

IEP (calculated)

6.68

GRAVY (calculated)

-0.25

Length

214 amino acids

Sequence (TAIR10)
(BLAST)

001: MFLQSQKLWT MLLILAIWSP ISHSLHFDLH SGRTKCIAED IKSNSMTVGK YNIDNPHEGQ ALPQTHKISV KVTSNSGNNY HHAEQVDSGQ FAFSAVEAGD
101: YMACFTAVDH KPEVSLSIDF EWKTGVQSKS WANVAKKSQV EVMEFEVKSL LDTVNSIHEE MYYLRDREEE MQDLNRSTNT KMAWLSVLSF FVCIGVAGMQ
201: FLHLKTFFEK KKVI