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AT4G19045.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.866
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Mob1/phocein family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Mob1/phocein family protein; CONTAINS InterPro DOMAIN/s: Mob1/phocein (InterPro:IPR005301); BEST Arabidopsis thaliana protein match is: Mob1/phocein family protein (TAIR:AT5G45550.1); Has 1268 Blast hits to 1256 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 710; Fungi - 287; Plants - 115; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XSUJeggNOG:KOG0440EMBL:AK117341EMBL:AL021687
EMBL:AL021711EMBL:AL161550EMBL:BT006214EMBL:CP002687
EnsemblPlants:AT4G19045EnsemblPlants:AT4G19045.1entrez:7922308Gene3D:1.20.140.30
GeneID:7922308Genevisible:Q8GYX0GO:GO:0046872Gramene:AT4G19045.1
hmmpanther:PTHR22599hmmpanther:PTHR22599:SF23HOGENOM:HOG000164685IntAct:Q8GYX0
InterPro:IPR005301iPTMnet:Q8GYX0KEGG:ath:AT4G19045KO:K06685
OMA:ENIFPSRPANTHER:PTHR22599PaxDb:Q8GYX0Pfam:PF03637
Pfam:Q8GYX0PhylomeDB:Q8GYX0PIR:T04426PRO:PR:Q8GYX0
ProteinModelPortal:Q8GYX0Proteomes:UP000006548RefSeq:NP_001154253.1SMART:SM01388
SMR:Q8GYX0STRING:3702.AT4G19045.1SUPFAM:0049093SUPFAM:SSF101152
TAIR:AT4G19045UniGene:At.43365UniProt:Q8GYX0
Coordinates (TAIR10) chr4:-:10438213..10439788
Molecular Weight (calculated) 24669.80 Da
IEP (calculated) 7.63
GRAVY (calculated) -0.25
Length 215 amino acids
Sequence (TAIR10)
(BLAST)
001: MSLFGLGRNQ KTFRPKKSAP SGTKGAELRK HIDATLGSGN LREAVKLPPG EDLNEWLAVN TVDFFNQVNL LFGTLTEFCT PENCSTMTAG PKYEYRWADG
101: VQIKKPIEVS APKYVEYLMD WIETQLDDET IFPQKLGAAF PPNFKEVVKT IFKRLFRVYA HIYHSHFQKI VSLKEEAHLN TCFKHFILFT HEFVLIDKKE
201: LAPLQELIES IIAPY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)