suba logo
AT5G45550.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
golgi 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Mob1/phocein family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Mob1/phocein family protein; CONTAINS InterPro DOMAIN/s: Mob1/phocein (InterPro:IPR005301); BEST Arabidopsis thaliana protein match is: Mob1/phocein family protein (TAIR:AT4G19045.1); Has 1269 Blast hits to 1261 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 709; Fungi - 290; Plants - 115; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XSUJeggNOG:KOG0440EMBL:AB018113EMBL:AK222194
EMBL:AY045864EMBL:AY086730EMBL:AY117158EMBL:CP002688
EnsemblPlants:AT5G45550EnsemblPlants:AT5G45550.1entrez:834591Gene3D:1.20.140.30
GeneID:834591Genevisible:Q9FHI1GO:GO:0005634GO:GO:0008283
GO:GO:0009553GO:GO:0009554GO:GO:0009556GO:GO:0010449
GO:GO:0016049GO:GO:0046872GO:GO:0048229GO:GO:0048364
GO:GO:0051301Gramene:AT5G45550.1hmmpanther:PTHR22599hmmpanther:PTHR22599:SF23
HOGENOM:HOG000164685InterPro:IPR005301iPTMnet:Q9FHI1KEGG:ath:AT5G45550
KO:K06685OMA:PFPRNFRPANTHER:PTHR22599PaxDb:Q9FHI1
Pfam:PF03637Pfam:Q9FHI1PhylomeDB:Q9FHI1PRIDE:Q9FHI1
PRO:PR:Q9FHI1ProteinModelPortal:Q9FHI1Proteomes:UP000006548RefSeq:NP_199368.1
SMART:SM01388SMR:Q9FHI1STRING:3702.AT5G45550.1SUPFAM:0049093
SUPFAM:SSF101152TAIR:AT5G45550UniGene:At.7037UniProt:Q9FHI1
Coordinates (TAIR10) chr5:+:18462284..18464840
Molecular Weight (calculated) 24697.70 Da
IEP (calculated) 8.09
GRAVY (calculated) -0.35
Length 215 amino acids
Sequence (TAIR10)
(BLAST)
001: MSLFGLGRNQ KTFRPKKSAP SGSKGAQLRK HIDATLGSGN LREAVRLPPG EDANEWLAVN TVDFFNQVNL LYGTLTEFCT PDNCPTMTAG PKYEYRWADG
101: VQIKKPIEVS APKYVEYLMD WIETQLDDET LFPQRLGAPF PQNFKDVVKT IFKRLFRVYA HIYHSHFQKI VSLKEEAHLN TCFKHFILFT HEFGLIDKKE
201: LAPLQELIES IISPY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)