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AT1G66760.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.768
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : MATE efflux family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: response to wounding; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G66780.1); Has 11372 Blast hits to 11171 proteins in 2068 species: Archae - 239; Bacteria - 8285; Metazoa - 148; Fungi - 331; Plants - 1323; Viruses - 0; Other Eukaryotes - 1046 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0534eggNOG:KOG1347EMBL:CP002684EnsemblPlants:AT1G66760
EnsemblPlants:AT1G66760.1entrez:842994ExpressionAtlas:F4HQ03GeneID:842994
GO:GO:0015238GO:GO:0015297GO:GO:0016021Gramene:AT1G66760.1
hmmpanther:PTHR11206hmmpanther:PTHR11206:SF87InterPro:IPR002528KEGG:ath:AT1G66760
KO:K03327PaxDb:F4HQ03Pfam:PF01554PRIDE:F4HQ03
ProteinModelPortal:F4HQ03Proteomes:UP000006548RefSeq:NP_564883.2SMR:F4HQ03
STRING:3702.AT1G66760.2TAIR:AT1G66760TIGRfam:TIGR00797TIGRFAMs:TIGR00797
TMHMM:TMhelixUniGene:At.26433UniProt:F4HQ03
Coordinates (TAIR10) chr1:+:24902110..24904054
Molecular Weight (calculated) 51064.00 Da
IEP (calculated) 7.95
GRAVY (calculated) 0.63
Length 466 amino acids
Sequence (TAIR10)
(BLAST)
001: MKKSIETPLL LNTKQSQDED KEKIRWEKMK KVASMAAPMV AVNMSQYLLQ ATSTMIVGHR SELALAGIAL GSSFANVTGF GVLFGLSGSL ETLCGQAYGA
101: KQYHKLGSYT FTSIVFLLII SVPISILWMF MNQILLLLHQ DPQIAELAGV YCLWLVPALF GYSVLESLVR YFQSQSLIYP MVLSSLAALS FHVPLCWLMV
201: HKFDFGAKGA AASIGISYWL NAVFLWVYMK RSSRCVETRI YMSKDVFVHT NIFFQFAIPS AMMCCLEWLA FEVITLLSGL LPNSKLETSV ISICLTTSSL
301: HYNLVNGIGD AASTNVANEL GAGNPRGARD SAAAAIIIAA VESVIVSSSL FLSRSVWPYA YSNVEEVISY VTDITPILCI SILMDSFLTV LSGIVRGTGW
401: QKIGAYVNIT SYYVIGIPVG LLLCFHLHFN GKGLWAGLVT GSTLQTLILF LVIGFTNWSK EVIVTA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)