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AT1G17350.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : NADH:ubiquinone oxidoreductase intermediate-associated protein 30
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
NADH:ubiquinone oxidoreductase intermediate-associated protein 30; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase intermediate-associated protein 30 (InterPro:IPR013857); BEST Arabidopsis thaliana protein match is: NADH:ubiquinone oxidoreductase intermediate-associated protein 30 (TAIR:AT1G72420.1); Has 552 Blast hits to 552 proteins in 198 species: Archae - 0; Bacteria - 134; Metazoa - 110; Fungi - 92; Plants - 100; Viruses - 0; Other Eukaryotes - 116 (source: NCBI BLink).
Protein Annotations
DNASU:838307eggNOG:ENOG410XQPBeggNOG:KOG2435EMBL:AC007843
EMBL:BT029384EMBL:CP002684EnsemblPlants:AT1G17350EnsemblPlants:AT1G17350.1
entrez:838307ExpressionAtlas:Q9LQI7GeneID:838307Genevisible:Q9LQI7
GO:GO:0005739hmmpanther:PTHR13194HOGENOM:HOG000029975InParanoid:Q9LQI7
InterPro:IPR008979InterPro:IPR013857PaxDb:Q9LQI7Pfam:PF08547
Pfam:Q9LQI7PhylomeDB:Q9LQI7PIR:B86310PRIDE:Q9LQI7
PRO:PR:Q9LQI7ProteinModelPortal:Q9LQI7Proteomes:UP000006548RefSeq:NP_173178.3
STRING:3702.AT1G17350.2SUPFAM:SSF49785TAIR:AT1G17350UniGene:At.47021
UniProt:Q9LQI7
Coordinates (TAIR10) chr1:+:5942391..5944272
Molecular Weight (calculated) 25249.70 Da
IEP (calculated) 6.28
GRAVY (calculated) -0.39
Length 227 amino acids
Sequence (TAIR10)
(BLAST)
001: MSRFRSLLQA SVNATKKALT WNVEEWVPPA EKHIFKFHSK EDLKKWHLYS DSEYGGLSSA SLEIPDKGDG SDCTGVFSGN LSVDLSEGSK WNISRSGFCG
101: MRSKKFDGFI DLDGYDAIAL RIRGDGRCYI STIYTENWVN SPGQSEDNSW QAFVFAPKDS WYTAKIPLAR YLPTWRGNVI DVEMEMNPGR VLGMSLSVNA
201: EGGAVGAKSG AGDFRVEIDW IKALRLP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)