AT2G45200.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 1.000 ASURE: golgi What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : golgi snare 12 | ||||||||||||
| Curator Summary (TAIR10) |
Encodes a member of the GOS1 (Golgi SNARE) gene family. | ||||||||||||
| Computational Description (TAIR10) |
golgi snare 12 (GOS12); FUNCTIONS IN: SNARE binding; INVOLVED IN: cellular membrane fusion, intra-Golgi vesicle-mediated transport; LOCATED IN: cytosol, integral to membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: golgi snare 11 (TAIR:AT1G15880.1); Has 416 Blast hits to 416 proteins in 175 species: Archae - 0; Bacteria - 4; Metazoa - 145; Fungi - 132; Plants - 101; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). | ||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:18637689..18639640 | ||||||||||||
| Molecular Weight (calculated) | 26471.70 Da | ||||||||||||
| IEP (calculated) | 9.64 | ||||||||||||
| GRAVY (calculated) | -0.32 | ||||||||||||
| Length | 239 amino acids | ||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTESSLDLQE SGWEELRREA RKIEGDLDVK LSSYAKLGAR FTQGGYVDTG SPTVGSGRSW KSMEMEIQSL LEKLLDINDS MSRCAASAAP TTSVTQKLAR 101: HRDILHEYTQ EFRRIKGNIN SLREHAELLS SVRDDISEYK ASGSMSPGVQ VLRERASIHG SISHIDDVIG QAQATRAVLG SQRSLFSDVQ GKVKNLGDKF 201: PVIRGLLGSI KRKRSRDTLI LSAVIAACTL FLIIYWLSK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)