AT4G28830.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.461 cytosol 0.310 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Putative RNA methylase (InterPro:IPR000241), DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052); Has 3625 Blast hits to 3623 proteins in 1319 species: Archae - 217; Bacteria - 2993; Metazoa - 122; Fungi - 3; Plants - 52; Viruses - 0; Other Eukaryotes - 238 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:14232490..14233917 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 23193.80 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.00 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.19 | ||||||||||||||||||||||||||||||||||||
| Length | 208 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKLKQLEGLL GDLEQFSNPK VEFEQYPTGP HIASRMLFTA ENSYGDITDK VVADFGCGCG TLSAAAALLD AASVIGFDID PESLETATLN AEELEVEIDF 101: VQCDITKLEL KGLIVDTVVM NPPFGTRKKG ADMEFLSAAM KVASKAVYSL HKTSTREHIK RAALRDFNAK SAEVICELRY DLPKLYKFHK RKEVDIAVDL 201: WRFEPRQN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)