AT1G70150.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 0.640 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : zinc ion binding | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
zinc ion binding; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, MYND-type (InterPro:IPR002893); Has 188 Blast hits to 183 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 69; Fungi - 18; Plants - 88; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:26416898..26419521 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 42203.00 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 6.67 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.09 | ||||||||||||||||||||||||||||
| Length | 374 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MECAARGFAT RCVGPPTRRC GQCGAVAYCS VSHQISHWSY HKEECERLEE QMRRVDLLND FPFTFTEEAT IQVSQKHETR CSFFIKRGLH RVGMWMYECN 101: CGALAFDSFN IEGWHLPSSS CPCRGPLSPI TKQLCTWKDY FEWRKLPLDS PVALLLHWPL TIYHAVQAIG MGNLTPQISD ELRIHYLGPQ KELGQLGVFA 201: ELQALFPGLR IYVDLIGPDV PQHMDGEMIS LCRYSPCMGK ECECKNSSKI LNSGSKPALV SAVSLQLRRG FYHDRYNDIT KDSFPPHIVI APNAGIAAYP 301: SWLPTIELIK EIQVPAVFSD YCEEACHLAA CCIKTITGQP LSSPIELNPF RQPMAVEEST LFIPCYSNCF IFAM |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)