AT2G35320.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.907 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : EYES ABSENT homolog | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
homologue of the animal Eyes Absent genes. encodes a tyrosine-specific phosphatase. the protein sequence lacks the cys-containing signature of the classical tyrosine phosphatases. belongs to the aspartate-based phosphatases. The enzyme activity is strictly metal-dependent. | ||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
EYES ABSENT homolog (EYA); CONTAINS InterPro DOMAIN/s: EYA (InterPro:IPR006545); Has 432 Blast hits to 431 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 379; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:14867074..14868387 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 35260.20 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.57 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.48 | ||||||||||||||||||||||||||||||||||||||||
| Length | 307 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNNDTSKKLG TLVSDDGPVN VYVWDMDETL ILLRSLLNGT YAESFNGSKD VKRGVEIGRM WEKHILKICD DFFFYEQVEE CNEPFLDSLR QYDDGKDLSR 101: YEFKQDDFST PTDDLNKRKL AYRHRAVAER YEKGLCPFID SESMSGLDEL YNVTDEYTDR WLSSARAFLE QCSCVEESSD GTSAIEQSSQ DIHILVTSGA 201: LIPSLVKCLL FRLDTFLRHE NVYSSIDVGK LQCFKWIKER FNHPKFRFCA IGDGWEECAA AQALQWPFVK IDLQPDSSHR FPGLTPKTVS YYFAAVYGNS 301: DADSSKE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)