AT4G34270.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.965 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : TIP41-like family protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
TIP41-like family protein; CONTAINS InterPro DOMAIN/s: TIP41-like protein (InterPro:IPR007303); Has 348 Blast hits to 346 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 123; Fungi - 127; Plants - 55; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:16404138..16406153 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 33076.60 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 5.29 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.31 | ||||||||||||||||||||||||||||
| Length | 290 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: METVVDKDVL KSSGAELLPD GRRGLRIHDW EIETLRGTIL TSLAVEEWEK KLKTSHLPEM VFGENALVLK HLGSNTKIHF NAFDALAGWK QEGLPPVEVP 101: AAAQWKFRSK PSQQVILDYD YTFTTPYCGS EVVEKDKETV EAKANPKGEA TLQWENCEDQ IDLAALSLKE PILFYDEVVL YEDELADNGV SLLTVKVRVM 201: PSSWFLLLRF WLRVDGVLMR LRETRMHYRF GEDEAPTVLR ENCWREATFQ SLSAKGYPVD LAVWSDPSSI SQRLPVIKHT TQKLKIPSKV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)