AT2G25570.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : binding | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Sel1-like (InterPro:IPR006597); Has 3445 Blast hits to 2037 proteins in 553 species: Archae - 0; Bacteria - 2582; Metazoa - 139; Fungi - 7; Plants - 69; Viruses - 6; Other Eukaryotes - 642 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:10885881..10887842 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 32411.90 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.12 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.31 | ||||||||||||||||||||||||||||||||||||
| Length | 288 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MFRRLILRQA AAVAAESKIA CHHTVHGFEQ RRGLHSRNEK AMEYVAKGWS AIKEVERVID YCELNDRRLI PLLRGAKENF ELALEADNLN THARYWLSKL 101: HLKYHVPGAC KAVGAALLVE AADMGNADAQ YELGCRLRVE NDHVQSDQQA FHYIENAVDQ LHPGALYLLG IVYLTGDCVK QDVDSAIWCF HRASEKGHAG 201: AAIAYGSLLL RGVQVPESLT KLNVVGVSPP KRARKNLENP EMNPLEMAKE QFQIAARAGC DLGLKWLQRV EQEEKLLMRE QDNECAYV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)