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AT1G11410.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:23990937 (2013): plasma membrane
  • PMID:22522809 (2012): cytosol cytosolic ribosomes
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : S-locus lectin protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine/threonine-protein kinase domain (InterPro:IPR002290), EGF-like, type 3 (InterPro:IPR000742), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G11340.1); Has 122302 Blast hits to 120413 proteins in 4701 species: Archae - 118; Bacteria - 13948; Metazoa - 44921; Fungi - 9999; Plants - 35002; Viruses - 441; Other Eukaryotes - 17873 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G11410-MONOMERBioGrid:22923EC:2.7.11.1eggNOG:COG0515
eggNOG:ENOG410IGVGEMBL:AC011661EMBL:CP002684EnsemblPlants:AT1G11410
EnsemblPlants:AT1G11410.1entrez:837683Gene3D:2.90.10.10GeneID:837683
Genevisible:Q9LPZ3GO:GO:0004674GO:GO:0005516GO:GO:0005524
GO:GO:0005886GO:GO:0016021GO:GO:0030246GO:GO:0048544
Gramene:AT1G11410.1hmmpanther:PTHR27002hmmpanther:PTHR27002:SF100InParanoid:Q9LPZ3
IntAct:Q9LPZ3InterPro:IPR000719InterPro:IPR000742InterPro:IPR000858
InterPro:IPR001245InterPro:IPR001480InterPro:IPR003609InterPro:IPR008271
InterPro:IPR011009InterPro:IPR021820InterPro:IPR024171KEGG:04150+2.7.11.1
KEGG:04151+2.7.11.1KEGG:ath:AT1G11410OMA:ITLKECEPaxDb:Q9LPZ3
Pfam:PF00954Pfam:PF01453Pfam:PF07714Pfam:PF08276
Pfam:PF11883Pfam:Q9LPZ3Pfscan:PS50011Pfscan:PS50026
Pfscan:PS50927Pfscan:PS50948Pfscan:PS51257PIRSF:PIRSF000641
PRIDE:Q9LPZ3PRO:PR:Q9LPZ3PROSITE:PS00108PROSITE:PS50011
PROSITE:PS50026PROSITE:PS50927PROSITE:PS50948ProteinModelPortal:Q9LPZ3
Proteomes:UP000006548RefSeq:NP_172608.2scanprosite:PS00108SMART:SM00108
SMART:SM00220SMART:SM00473SMR:Q9LPZ3STRING:3702.AT1G11410.1
SUPFAM:SSF51110SUPFAM:SSF56112TAIR:AT1G11410TMHMM:TMhelix
UniGene:At.16618UniProt:Q9LPZ3
Coordinates (TAIR10) chr1:+:3841286..3844284
Molecular Weight (calculated) 95867.60 Da
IEP (calculated) 8.04
GRAVY (calculated) -0.31
Length 845 amino acids
Sequence (TAIR10)
(BLAST)
001: MKFFFIFFIF LFSFLIQSCY SDNTILRSQS LKDGDVIYSE GKRFAFGFFS LGNSKLRYVG IWYAQVSEQT IVWVANRDHP INDTSGLIKF STRGNLCVYA
101: SGNGTEPIWS TDVIDMIQEP ALVAKLSDLG NLVLLDPVTG KSFWESFNHP TNTLLPFMKF GFTRQSGVDR IMTSWRSPGD PGSGNITYRI ERRGFPQMMM
201: YKGLTLWWRT GSWTGQRWSG VPEMTNKFIF NISFVNNPDE VSITYGVLDA SVTTRMVLNE TGTLQRFRWN GRDKKWIGFW SAPEDKCDIY NHCGFNGYCD
301: STSTEKFECS CLPGYEPKTP RDWFLRDASD GCTRIKADSI CNGKEGFAKL KRVKIPNTSA VNVDMNITLK ECEQRCLKNC SCVAYASAYH ESQDGAKGCL
401: TWHGNMLDTR TYLSSGQDFY LRVDKSELAR WNGNGASGKK RLVLILISLI AVVMLLLISF HCYLRKRRQR TQSNRLRKAP SSFAPSSFDL EDSFILEELE
501: DKSRSRELPL FELSTIATAT NNFAFQNKLG AGGFGPVYKG VLQNGMEIAV KRLSKSSGQG MEEFKNEVKL ISKLQHRNLV RILGCCVEFE EKMLVYEYLP
601: NKSLDYFIFH EEQRAELDWP KRMGIIRGIG RGILYLHQDS RLRIIHRDLK ASNVLLDNEM IPKIADFGLA RIFGGNQIEG STNRVVGTYG YMSPEYAMDG
701: QFSIKSDVYS FGVLILEIIT GKRNSAFYEE SLNLVKHIWD RWENGEAIEI IDKLMGEETY DEGEVMKCLH IGLLCVQENS SDRPDMSSVV FMLGHNAIDL
801: PSPKHPAFTA GRRRNTKTGG SSDNWPSGET SSTINDVTLT DVQGR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)