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AT4G03070.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.990
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Curator
Summary (TAIR10)
Encodes a possible 2-oxoglutarate-dependent dioxygenase that is involved in glucosinolate biosynthesis. The gene is expressed in all ecotypes examined but the enzymatic activity has not been determined experimentally. In Col, there is one copy of this gene (aka AOP1.1) but Ler contains two copies, AOP1.1 and a tightly linked AOP1.2.
Computational
Description (TAIR10)
AOP1; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; INVOLVED IN: glucosinolate biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G52820.1); Has 7341 Blast hits to 7267 proteins in 919 species: Archae - 0; Bacteria - 920; Metazoa - 64; Fungi - 670; Plants - 4573; Viruses - 0; Other Eukaryotes - 1114 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G03070-MONOMEREC:1.14.11.-eggNOG:COG3491eggNOG:KOG0143
EMBL:AF069442EMBL:AF417855EMBL:AL161496EMBL:CP002687
EnsemblPlants:AT4G03070EnsemblPlants:AT4G03070.1entrez:828100Gene3D:2.60.120.330
GeneID:828100Genevisible:Q9ZTA3GO:GO:0016020GO:GO:0046872
GO:GO:0051213Gramene:AT4G03070.1gramene_pathway:1.14.11.-gramene_pathway:1.14.11.13
gramene_pathway:PWY-102hmmpanther:PTHR10209hmmpanther:PTHR10209:SF211HOGENOM:HOG000241611
InParanoid:Q9ZTA3InterPro:IPR005123InterPro:IPR026992InterPro:IPR027443
KEGG:ath:AT4G03070OMA:KRRNYYGPaxDb:Q9ZTA3Pfam:PF03171
Pfam:PF14226Pfam:Q9ZTA3Pfscan:PS51471PhylomeDB:Q9ZTA3
PIR:T01386PRIDE:Q9ZTA3PRO:PR:Q9ZTA3PROSITE:PS51471
ProteinModelPortal:Q9ZTA3Proteomes:UP000006548RefSeq:NP_192216.1SMR:Q9ZTA3
STRING:3702.AT4G03070.1SUPFAM:SSF51197TAIR:AT4G03070tair10-symbols:AOP
tair10-symbols:AOP1tair10-symbols:AOP1.1UniGene:At.26278UniGene:At.48826
UniProt:Q9ZTA3
Coordinates (TAIR10) chr4:+:1358442..1359620
Molecular Weight (calculated) 36913.60 Da
IEP (calculated) 4.68
GRAVY (calculated) -0.39
Length 322 amino acids
Sequence (TAIR10)
(BLAST)
001: MDSDFVPPSV SFQLPVIDFS DQNLKPGSSK WDEVTADVLK ALEDYGCFEA SFDKLSVELN RSVFEAMEDL FELPIPTKQR NVSSKPFHGY LCHNLYESLG
101: INDANVLEKV NDFTQQLWPD HGNKSISETI HLFSEQLVEL DLMVRRMIME SFGIENYIDE HLNSTYYLTR LMKYTSPPDD DDDDDEETKL GLRSHTDKNI
201: ITILHQYQVD GLEVKTKDDK WIKVKPSQDS VLVMVGDSLC ALLNGRLHSP YHRVIMTGKK TRYSTGLFSI PKTGVIIDSP EELVDKEHPR IFKPFEYTDF
301: LHFFQTEAGR IAQSALHAFA AF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)