AT1G03160.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 ASURE: plastid What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : FZO-like | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
A new plant-specific member of the dynamin superfamily; defines a new protein class within the dynamin superfamily of membrane remodeling GTPases that regulates organization of the thylakoid network in plants. Targeted to chloroplasts and associated with thylakoid and envelope membranes as punctate structures. Knockout mutants have abnormalities in chloroplast and thylakoid morphology, including disorganized grana stacks and alterations in the relative proportions of grana and stroma thylakoids. Overexpression of FZL-GFP also conferred defects in thylakoid organization. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
FZO-like (FZL); FUNCTIONS IN: thiamin-phosphate diphosphorylase activity, GTP binding; INVOLVED IN: vegetative to reproductive phase transition of meristem, thylakoid membrane organization; LOCATED IN: chloroplast membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiamine monophosphate synthase (InterPro:IPR003733), GTP-binding protein, HSR1-related (InterPro:IPR002917); Has 4318 Blast hits to 3768 proteins in 1124 species: Archae - 53; Bacteria - 3501; Metazoa - 428; Fungi - 84; Plants - 66; Viruses - 0; Other Eukaryotes - 186 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:761321..766053 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 100736.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.63 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.10 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 912 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MRTLISHRQC VTSPFLISAA SPPFPGRCFK LSSFTPPRHR RFSSLSIRNI SHESADQTSS SRPRTLYPGG YKRPELAVPG LLLRLDADEV MSGNREETLD 101: LVDRALAKSV QIVVIDGGAT AGKLYEAACL LKSLVKGRAY LLIAERVDIA SAVGASGVAL SDEGLPAIVA RNTLMGSNPD SVLLPLVARI VKDVDSALIA 201: SSSEGADFLI LGSGEEDTQV ADSLLKSVKI PIYVTCRGNE EAKEELQLLK SGVSGFVISL KDLRSSRDVA LRQSLDGAYV VNNHETQNMN ELPEKKNSAG 301: FIKLEDKQKL IVEMEKSVLR ETIEIIHKAA PLMEEVSLLI DAVSRIDEPF LMVIVGEFNS GKSTVINALL GKRYLKEGVV PTTNEITFLC YSDLESEEQQ 401: RCQTHPDGQY VCYLPAPILK DINIVDTPGT NVILQRQQRL TEEFVPRADL LVFVLSADRP LTESEVAFLR YTQQWKKKFV FILNKSDIYR DARELEEAIS 501: FVKENTRKLL NTENVILYPV SARSALEAKL STASLVGRDD LEIADPGSNW RVQSFNELEK FLYSFLDSST ATGMERIRLK LETPMAIAER LLSSVEALVR 601: QDCLAAREDL ASADKIISRT KEYALKMEYE SISWRRQALS LIDNARLQVV DLIGTTLRLS SLDLAISYVF KGEKSASVAA TSKVQGEILA PALTNAKELL 701: GKYAEWLQSN TAREGSLSLK SFENKWPTYV NSKTQLGIDT YDLLQKTDKV SLKTIQNLSA GTTSKRLEQD IREVFFVTVG GLGAAGLSAS LLTSVLPTTL 801: EDLLALGLCS AGGYVAIANF PYRRQAIIGK VNKVADALAQ QLEDAMQKDL SDATSNLVNF VNIVAKPYRE EAQLRLDRLL GIQKELSDIR SKLQLLQVDI 901: DNLHVSRDEM RL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)