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AT4G14560.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : indole-3-acetic acid inducible
Curator
Summary (TAIR10)
auxin (indole-3-acetic acid) induced gene (IAA1) encoding a short-lived nuclear-localized transcriptional regulator protein.
Computational
Description (TAIR10)
indole-3-acetic acid inducible (IAA1); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 2 (TAIR:AT3G23030.1); Has 1898 Blast hits to 1895 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1895; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
DNASU:827103EMBL:AK176546EnsemblPlants:AT4G14560EnsemblPlants:AT4G14560.1entrez:827103ExpressionAtlas:Q67YC2GeneID:827103
GO:GO:0005634GO:GO:0006351GO:GO:0006355GO:GO:0009734Gramene:AT4G14560.1hmmpanther:PTHR31734hmmpanther:PTHR31734:SF11
HOGENOM:HOG000238261InterPro:IPR000270InterPro:IPR003311InterPro:IPR033389KEGG:ath:AT4G14560KO:K14484OMA:ENMFKCS
PANTHER:PTHR31734PaxDb:Q67YC2Pfam:P49677Pfam:PF02309Pfscan:PS51745PhylomeDB:Q67YC2PIR:A71408
PRIDE:Q67YC2PROSITE:PS51745ProteinModelPortal:Q67YC2RefSeq:NP_193192.1SMR:Q67YC2STRING:3702.AT4G14560.1SUPFAM:SSF54277
TAIR:AT4G14560tair10-symbols:AXR5tair10-symbols:IAA1UniGene:At.43941UniProt:P49677UniProt:Q67YC2
Coordinates (TAIR10) chr4:+:8361182..8361780
Molecular Weight (calculated) 19032.60 Da
IEP (calculated) 8.16
GRAVY (calculated) -0.81
Length 168 amino acids
Sequence (TAIR10)
(BLAST)
001: MEVTNGLNLK DTELRLGLPG AQEEQQLELS CVRSNNKRKN NDSTEESAPP PAKTQIVGWP PVRSNRKNNN NKNVSYVKVS MDGAPYLRKI DLKMYKNYPE
101: LLKALENMFK FTVGEYSERE GYKGSGFVPT YEDKDGDWML VGDVPWDMFS SSCQKLRIMK GSEAPTAL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)