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AT2G37560.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : origin recognition complex second largest subunit 2
Curator
Summary (TAIR10)
Origin Recognition Complex subunit 2. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts strongly with all ORC subunits.
Computational
Description (TAIR10)
origin recognition complex second largest subunit 2 (ORC2); CONTAINS InterPro DOMAIN/s: Origin recognition complex, subunit 2 (InterPro:IPR007220); Has 366 Blast hits to 364 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 129; Fungi - 134; Plants - 46; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink).
Protein Annotations
BioGrid:3676DNASU:818332eggNOG:COG5575eggNOG:KOG2928EMBL:AC004684EMBL:AY070386EMBL:AY088188
EMBL:AY096598EMBL:CP002685EMBL:U40269EnsemblPlants:AT2G37560EnsemblPlants:AT2G37560.1entrez:818332ExpressionAtlas:Q38899
GeneID:818332Genevisible:Q38899GO:GO:0000808GO:GO:0003688GO:GO:0005634GO:GO:0006260hmmpanther:PTHR14052
hmmpanther:PTHR14052:SF0HOGENOM:HOG000029369InParanoid:Q38899IntAct:Q38899InterPro:IPR007220KEGG:ath:AT2G37560KO:K02604
OMA:WVFELRCPANTHER:PTHR14052PaxDb:Q38899Pfam:PF04084Pfam:Q38899PhylomeDB:Q38899PIR:T02522
PRIDE:Q38899PRO:PR:Q38899ProteinModelPortal:Q38899Proteomes:UP000006548Reactome:R-ATH-68616Reactome:R-ATH-68689Reactome:R-ATH-68867
Reactome:R-ATH-68949Reactome:R-ATH-68962Reactome:R-ATH-69298RefSeq:NP_181292.1SMR:Q38899STRING:3702.AT2G37560.1TAIR:AT2G37560
tair10-symbols:ATORC2tair10-symbols:ORC2UniGene:At.12789UniGene:At.66382UniProt:Q38899
Coordinates (TAIR10) chr2:+:15759568..15761116
Molecular Weight (calculated) 40813.60 Da
IEP (calculated) 5.73
GRAVY (calculated) -0.25
Length 363 amino acids
Sequence (TAIR10)
(BLAST)
001: MEDIENIEED EYGFSRNYFL AKELGGASKR SAHKLSDIHI VDEQELRETA STIEMKHSKE ISELMSDYKT MYSKWVFELR CGFGLLMYGF GSKKALVEDF
101: ASASLTDYSV VVINGYLPSV NLKQVLLALA ELLSELLKCK RKSSGSLSKG QETFPSRSMD DILSFLHGPQ SGDKDCFICV VVHNIDGPAL RDPESQQTLA
201: RLSSCSHIRL VASIDHVNAP LLWDKKMVHK QFNWLWHHVP TFAPYNVEGV FFPLVLAQGS TAQTAKTAAI VLQSLTPNGQ NVFKILAEYQ LSHPDEDGMP
301: TDDLYSASRE RFFVSSQVTL NSHLTEFKDH ELVKTKRNSD GQECLNIPLT SDAIRQLLLD LNQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)