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AT1G26840.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : origin recognition complex protein 6
Curator
Summary (TAIR10)
Origin Recognition Complex subunit 6. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors.
Computational
Description (TAIR10)
origin recognition complex protein 6 (ORC6); FUNCTIONS IN: DNA binding; INVOLVED IN: DNA replication; LOCATED IN: origin recognition complex; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Origin recognition complex, subunit 6, metazoa/plant (InterPro:IPR020529), Origin recognition complex, subunit 6 (InterPro:IPR008721); Has 179 Blast hits to 179 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 105; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG4111GUYeggNOG:KOG4557EMBL:AC005508EMBL:AJ575584
EMBL:CP002684EnsemblPlants:AT1G26840EnsemblPlants:AT1G26840.1entrez:839227
GeneID:839227Genevisible:Q9ZVH3GO:GO:0000808GO:GO:0003677
GO:GO:0005664GO:GO:0006260GO:GO:0009555Gramene:AT1G26840.1
hmmpanther:PTHR13394hmmpanther:PTHR13394:SF0HOGENOM:HOG000242464InParanoid:Q9ZVH3
IntAct:Q9ZVH3InterPro:IPR008721InterPro:IPR020529KEGG:ath:AT1G26840
KO:K02608OMA:TSMTDLCPaxDb:Q9ZVH3Pfam:PF05460
Pfam:Q9ZVH3PhylomeDB:Q9ZVH3PIR:B86395PRIDE:Q9ZVH3
PRO:PR:Q9ZVH3ProDom:PD315657ProteinModelPortal:Q9ZVH3Proteomes:UP000006548
Reactome:R-ATH-68616Reactome:R-ATH-68689Reactome:R-ATH-68867Reactome:R-ATH-68949
Reactome:R-ATH-68962RefSeq:NP_174006.2SMR:Q9ZVH3STRING:3702.AT1G26840.1
TAIR:AT1G26840tair10-symbols:ATORC6tair10-symbols:ORC6UniGene:At.50784
UniProt:Q9ZVH3
Coordinates (TAIR10) chr1:+:9298822..9300603
Molecular Weight (calculated) 31771.50 Da
IEP (calculated) 9.85
GRAVY (calculated) -0.34
Length 284 amino acids
Sequence (TAIR10)
(BLAST)
001: MDISDIGRKL SLDNNKLLIR KAAEIRRLCD AQFDSSIIGV GEICKAVICL EIAATRLQII FDRQAAVKLS GMSEKAYSRS FNSLQNVIGI KIKLNVRELA
101: VQFGCVRVIK SVQNVLSSYK ERFLASLPAS RRANADFTRP VFTAAAFYLC AKKQKLKVDK LRLIEVCGTS ESEFSCVSTS MTDLCFDCVG ISKEKKDAKD
201: VKGNRDLLDV LPGKRRLEDG GYSSGDESSC YKRHKKMEEA KYEDWKSTVV NSIKKNPEKG TKRVIQASLN FPKKSETKEL QVDS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)