AT2G20980.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : minichromosome maintenance 10 | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Similar to MCM10, which in other organism was shown to be involved in the initiation of DNA replication. | ||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
minichromosome maintenance 10 (MCM10); CONTAINS InterPro DOMAIN/s: Zinc finger, Mcm10/DnaG-type (InterPro:IPR015408); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:9011654..9013856 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 43712.90 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.99 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.72 | ||||||||||||||||||||||||||||||||
| Length | 396 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MENDQEDLEL LLSLDDRVLE TPPGSPSAAP GYLTDDESPK RRGHSDLSDF RSVVQDCIDY NPKPIAKNTK PKGSNNSNTN DIEKFSGLRI RNQLLSPAEI 101: SDLFSDIRFV RLPTIKNLLM GDKLSGCWAT MGVITEKGQP KTSSIGQAYG IWKIGSLNEN NVSLFLFGDA YKKNETEKAG TVFGLFNCSL RKDNGGREFS 201: LSVNSAKQMV KLGVSADYGV CTAKRKDGTT CTSVVNKRQG AFCKIHKLNA SDKFATMRTE LKGGNLRTAF RDLKSQGIYT VEPPADRSGN KKTTQPVRVL 301: SVEGLRKALS GADKVTPNVH SQGIRFLNEM ARQKASKNVN KKSEAVNKST EKRKASTKET QVNGEPKRKK TEHRKETPEI STGKMMLLDF CSSDEE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)