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AT1G75150.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 38228 Blast hits to 24529 proteins in 1168 species: Archae - 169; Bacteria - 4103; Metazoa - 14594; Fungi - 5866; Plants - 1861; Viruses - 317; Other Eukaryotes - 11318 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IXFHeggNOG:ENOG41125BHEMBL:CP002684EnsemblPlants:AT1G75150
EnsemblPlants:AT1G75150.1entrez:843852GeneID:843852Gramene:AT1G75150.1
hmmpanther:PTHR36005InParanoid:F4HXG0iPTMnet:F4HXG0KEGG:ath:AT1G75150
ncoils:CoilOMA:HQKWLQQPaxDb:F4HXG0PRIDE:F4HXG0
ProteinModelPortal:F4HXG0Proteomes:UP000006548RefSeq:NP_177651.2STRING:3702.AT1G75150.1
TAIR:AT1G75150UniGene:At.50968UniProt:F4HXG0
Coordinates (TAIR10) chr1:-:28204709..28208512
Molecular Weight (calculated) 88779.70 Da
IEP (calculated) 4.33
GRAVY (calculated) -1.19
Length 784 amino acids
Sequence (TAIR10)
(BLAST)
001: MMNDDQLSPI GESSVPVPNR MLRRLKKAKL ISDSCPGSET FDSENPDGED LGKSELQSAK GCDGIEEEDG VPSDLDGLGV EDGVTARKVL DFDYVPEFNQ
101: TIEDLGEKSG SEISDSETRD EIRVSETTES EKEDPDFETT VHEFDSPMEE LGEKGEDEEE IRVPETKEAG KKRPIVETRD GEGKERKRDK KRKKKSDDFD
201: ELPVSTASMN MTKKERREYL DQLRAENQRL LRETRDAAFE AAPLVRKPIS SVLEKIRRRK EEISKQFLSR KKSKSIDICD RDDFEDVVAE EMNEDMNLTS
301: KQNSAGQHCS EDSAGPSENS DSPSKREAES NPTHQDPSVC PQTINSGDEL LEKMSSRSLE EVMTPSVVAM NLKLNLSPVP DKSSEEAEYI KGNSDPEIHD
401: SPGDPVRKFI DEDAEEEDDS DNDLLRFEDE DDDEDEDDDD LRDMIVSQFK EDPTDKDRRN ELHQKWLEQQ DAAGTEKLLQ KLKRGVQHDE TLLSEDEDDD
501: VDDDDEERPE GADGEEVQKP EANEDEDEDE DEEDPSHANS MRMTIKKIKE MIPLMFTDED DVYVSSDDEE MEKKLLQQRL YKKMELKAKS SSSTADENSE
601: EILRHIKKPE IKKKAKPSSF KERALMEINK NPAASKSSFL GRLTKSSISE GSRKRGSNVV RGYIFERDDS NSKSSNSVAE EPSVPETIIQ EKSRPKRAPA
701: KFTASQSQER STTLQATVVE KETSTRQRST LYEILKMSSK KTSFNSRETM ISSNHTESIF AAFKLDKKPV KTNPQLQCNG TCGE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)