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AT5G20930.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:24872594 (2014): plastid
  • PMID:15028209 (2004): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Nuclear serine/threonine protein kinase that requires a coiled-coil region for oligomerization and catalytic activity. Required for leaf and flower development. Expression localized to the developing style by stage 13.
Computational
Description (TAIR10)
TOUSLED (TSL); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, chloroplast, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: ataurora3 (TAIR:AT2G45490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G20930-MONOMERBioGrid:17492EC:2.7.11.1eggNOG:ENOG410Y3FX
eggNOG:KOG1151EMBL:AF296834EMBL:AY099604EMBL:BT000260
EMBL:CP002688EMBL:L23985EnsemblPlants:AT5G20930EnsemblPlants:AT5G20930.1
entrez:832217GeneID:832217Genevisible:Q39238GO:GO:0004674
GO:GO:0005524GO:GO:0005634GO:GO:0005737GO:GO:0009507
GO:GO:0042802Gramene:AT5G20930.1hmmpanther:PTHR22974hmmpanther:PTHR22974:SF23
HOGENOM:HOG000259522InParanoid:Q39238IntAct:Q39238InterPro:IPR000719
InterPro:IPR008271InterPro:IPR011009InterPro:IPR017441KEGG:ath:AT5G20930
KO:K08864ncoils:CoilOMA:HRHACREPaxDb:Q39238
Pfam:PF00069Pfam:Q39238Pfscan:PS50011PhylomeDB:Q39238
PIR:A49318PRIDE:Q39238PRO:PR:Q39238PROSITE:PS00107
PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:Q39238Proteomes:UP000006548
RefSeq:NP_568405.1scanprosite:PS00107scanprosite:PS00108SMART:SM00220
SMR:Q39238STRING:3702.AT5G20930.1SUPFAM:SSF56112TAIR:AT5G20930
tair10-symbols:TSLUniGene:At.325UniProt:Q39238
Coordinates (TAIR10) chr5:+:7098213..7102970
Molecular Weight (calculated) 78153.40 Da
IEP (calculated) 8.26
GRAVY (calculated) -0.76
Length 688 amino acids
Sequence (TAIR10)
(BLAST)
001: MSDDMVLHFS SNSSNQSDHS LPDKIAKLEA RLTGKTPSSA KPPQQQQQQQ QQVSLWSSAS AAVKVVTSTP PGLSETSISD SDDENTGDFL IRANTKKRQK
101: VQESNNFSVV DHVEPQEAAY DGRKNDAESK TGLDVSKKKQ GRGRASSTGR GRGSKTNNDV TKSQFVVAPV SAASQLDASD QKDFRPDGQL RNGECSLQDE
201: DLKSLRAKIA MLEEELRKSR QDSSEYHHLV RNLENEVKDL KDQEQQGKQK TTKVISDLLI SVSKTERQEA RTKVRNESLR LGSVGVLRTG TIIAETWEDG
301: QMLKDLNAQL RQLLETKEAI ERQRKLLKKR QNGDKNDGTD TESGAQEEDI IPDEVYKSRL TSIKREEEAV LRERERYTLE KGLLMREMKR IRDEDGSRFN
401: HFPVLNSRYA LLNLLGKGGF SEVYKAYDLV DHRYVACKLH GLNAQWSEEK KQSYIRHANR ECEIHKSLVH HHIVRLWDKF HIDMHTFCTV LEYCSGKDLD
501: AVLKATSNLP EKEARIIIVQ IVQGLVYLNK KSQKIIHYDL KPGNVLFDEF GVAKVTDFGL SKIVEDNVGS QGMELTSQGA GTYWYLPPEC FELNKTPMIS
601: SKVDVWSVGV LFYQMLFGKR PFGHDQSQER ILREDTIIKA KKVEFPVTRP AISNEAKDLI RRCLTYNQED RPDVLTMAQD PYLAYSKK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)