AT5G20930.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Nuclear serine/threonine protein kinase that requires a coiled-coil region for oligomerization and catalytic activity. Required for leaf and flower development. Expression localized to the developing style by stage 13. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
TOUSLED (TSL); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, chloroplast, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: ataurora3 (TAIR:AT2G45490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:7098213..7102970 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 78153.40 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.26 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.76 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 688 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSDDMVLHFS SNSSNQSDHS LPDKIAKLEA RLTGKTPSSA KPPQQQQQQQ QQVSLWSSAS AAVKVVTSTP PGLSETSISD SDDENTGDFL IRANTKKRQK 101: VQESNNFSVV DHVEPQEAAY DGRKNDAESK TGLDVSKKKQ GRGRASSTGR GRGSKTNNDV TKSQFVVAPV SAASQLDASD QKDFRPDGQL RNGECSLQDE 201: DLKSLRAKIA MLEEELRKSR QDSSEYHHLV RNLENEVKDL KDQEQQGKQK TTKVISDLLI SVSKTERQEA RTKVRNESLR LGSVGVLRTG TIIAETWEDG 301: QMLKDLNAQL RQLLETKEAI ERQRKLLKKR QNGDKNDGTD TESGAQEEDI IPDEVYKSRL TSIKREEEAV LRERERYTLE KGLLMREMKR IRDEDGSRFN 401: HFPVLNSRYA LLNLLGKGGF SEVYKAYDLV DHRYVACKLH GLNAQWSEEK KQSYIRHANR ECEIHKSLVH HHIVRLWDKF HIDMHTFCTV LEYCSGKDLD 501: AVLKATSNLP EKEARIIIVQ IVQGLVYLNK KSQKIIHYDL KPGNVLFDEF GVAKVTDFGL SKIVEDNVGS QGMELTSQGA GTYWYLPPEC FELNKTPMIS 601: SKVDVWSVGV LFYQMLFGKR PFGHDQSQER ILREDTIIKA KKVEFPVTRP AISNEAKDLI RRCLTYNQED RPDVLTMAQD PYLAYSKK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)