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AT4G29910.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : origin recognition complex protein 5
Curator
Summary (TAIR10)
Origin Recognition Complex subunit 5. Involved in the initiation of DNA replication. Interacts strongly with all ORC subunits.
Computational
Description (TAIR10)
origin recognition complex protein 5 (ORC5); CONTAINS InterPro DOMAIN/s: Origin recognition complex, subunit 5 (InterPro:IPR020796); Has 287 Blast hits to 283 proteins in 127 species: Archae - 0; Bacteria - 0; Metazoa - 140; Fungi - 92; Plants - 43; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XSY0eggNOG:KOG2543EMBL:AJ575583EMBL:AK226860EMBL:AL050352EMBL:AL161575EMBL:CP002687
EnsemblPlants:AT4G29910EnsemblPlants:AT4G29910.1entrez:829114Gene3D:3.40.50.300GeneID:829114Genevisible:Q6EWX0GO:GO:0000808
GO:GO:0005524GO:GO:0005634GO:GO:0006260Gramene:AT4G29910.1hmmpanther:PTHR12705HOGENOM:HOG000005960InParanoid:Q6EWX0
IntAct:Q6EWX0InterPro:IPR020796InterPro:IPR027417KEGG:ath:AT4G29910KO:K02607OMA:GEQNIMDPANTHER:PTHR12705
PaxDb:Q6EWX0Pfam:PF14630Pfam:Q6EWX0PhylomeDB:Q6EWX0PIR:T08552PRIDE:Q6EWX0PRO:PR:Q6EWX0
ProteinModelPortal:Q6EWX0Proteomes:UP000006548Reactome:R-ATH-68616Reactome:R-ATH-68689Reactome:R-ATH-68867Reactome:R-ATH-68949Reactome:R-ATH-68962
Reactome:R-ATH-69298RefSeq:NP_194720.2SMR:Q6EWX0STRING:3702.AT4G29910.1SUPFAM:SSF52540TAIR:AT4G29910tair10-symbols:ATORC5
tair10-symbols:ORC5UniGene:At.31879UniProt:Q6EWX0
Coordinates (TAIR10) chr4:-:14628154..14630055
Molecular Weight (calculated) 60641.60 Da
IEP (calculated) 6.71
GRAVY (calculated) -0.37
Length 534 amino acids
Sequence (TAIR10)
(BLAST)
001: MPPKEESSKV TRRSTRSSAS VTVENSEPIE SHTPTIDDLT FGEESITIDA VLSNFPGRRS QIFDFIRLMG PLDCPTLPIM IYGGASTGKT SVVLQVLRHL
101: NRPFVYSSCR TCYNPRILFE SILNQSLLHR KCSLNGYSSA KRCDKPSDFV NLLREALSSV IKTLESTSET SRSDKPDEKP MGKMVYLILD NVDLIRDWDK
201: GTIILQFLFS LYTVLKMPQL GIILISGLPP DVYYSNMGYT DPIPLYFPEY SEEDLRQIFL RNQPNRKLYS AFLDVVLKPF CRVTRRVEEL STTFSLLFRK
301: FCEPLDDLGI SPNEDMKRRL YSHLKPLIAH CLNEIFRVSS HPHDGETRGE RRQKASYSSE NREELEILDF HMSTSAKFLL LSAFLASRNP ATLDASMFDS
401: TGGMDNRKRK RKASEKSMEK KEIAEQEAVM KGPGSFPLER LLAIFQCIAS VGDSSFGEED EEEENTTGYD KENNNLMSDI LLQVSSLCDA NFLIKSGSCP
501: LEGSIRYRSM VSEDLAQKVA KSLSFPLSKY LYRR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)