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AT4G00080.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Plant invertase/pectin methylesterase inhibitor superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unfertilized embryo sac 11 (UNE11); FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: double fertilization forming a zygote and endosperm; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT1G62770.1); Has 574 Blast hits to 571 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 574; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JDTAeggNOG:ENOG41118ZAEMBL:AF069299EMBL:AK228011
EMBL:AL161471EMBL:BT006197EMBL:CP002687EnsemblPlants:AT4G00080
EnsemblPlants:AT4G00080.1entrez:828192Gene3D:1.20.140.40GeneID:828192
GO:GO:0004857GO:GO:0009567GO:GO:0043086Gramene:AT4G00080.1
hmmpanther:PTHR31080hmmpanther:PTHR31080:SF24HOGENOM:HOG000240597InterPro:IPR006501
KEGG:00040+3.1.1.11KEGG:00500+3.1.1.11KEGG:ath:AT4G00080OMA:AYIEASC
Pfam:PF04043PhylomeDB:O81309PIR:T01336Proteomes:UP000006548
RefSeq:NP_191919.1SMART:SM00856STRING:3702.AT4G00080.1SUPFAM:SSF101148
TAIR:AT4G00080tair10-symbols:UNE11TIGRfam:TIGR01614TIGRFAMs:TIGR01614
TMHMM:TMhelixUniGene:At.34600unipathway:UPA00545UniProt:O81309
Coordinates (TAIR10) chr4:+:32946..33575
Molecular Weight (calculated) 23975.90 Da
IEP (calculated) 10.55
GRAVY (calculated) -0.38
Length 209 amino acids
Sequence (TAIR10)
(BLAST)
001: MAANNKLFFV LLSLFPLIIF SATATSSKDY DTKAYVHSWC RTTLYPKLCV RSMSRYVRSR AVQNPRDLAR FALKASLYRA KYTKAFLLKE VKNLETTLRP
101: QYYASVHDCL DQIRDSVNQL SLAIAELDRV SRRQGKSQGD LHWHINNLQT WTSTALTDAE TCVSQFPGRR MSKLKATIKG KVKNVEETTS NALAFIEHYA
201: AARYRARRP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)