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AT2G01120.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : origin recognition complex subunit 4
Curator
Summary (TAIR10)
Origin Recognition Complex subunit 4. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts with all ORC subunits except ORC1b.
Computational
Description (TAIR10)
origin recognition complex subunit 4 (ORC4); CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), Origin recognition complex, subunit 4 (InterPro:IPR016527); Has 675 Blast hits to 668 proteins in 199 species: Archae - 9; Bacteria - 0; Metazoa - 335; Fungi - 166; Plants - 90; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink).
Protein Annotations
DNASU:814641eggNOG:ENOG410XSK0eggNOG:KOG2228EMBL:AC006837EMBL:AJ575582EMBL:AJ586913EMBL:AY524003
EMBL:BT011206EMBL:BT011662EMBL:CP002685EnsemblPlants:AT2G01120EnsemblPlants:AT2G01120.1entrez:814641ExpressionAtlas:Q6EWX1
Gene3D:3.40.50.300GeneID:814641Genevisible:Q6EWX1GO:GO:0000808GO:GO:0003677GO:GO:0005524GO:GO:0005634
GO:GO:0006260Gramene:AT2G01120.1hmmpanther:PTHR12087hmmpanther:PTHR12087:SF0HOGENOM:HOG000007226IntAct:Q6EWX1InterPro:IPR003959
InterPro:IPR016527InterPro:IPR027417InterPro:IPR032705PANTHER:PTHR12087:SF0PaxDb:Q6EWX1Pfam:PF00004Pfam:PF13191
Pfam:PF14629PhylomeDB:Q6EWX1PIR:H84420PIRSF:PIRSF007858PRO:PR:Q6EWX1ProteinModelPortal:Q6EWX1Proteomes:UP000006548
Reactome:R-ATH-68616Reactome:R-ATH-68689Reactome:R-ATH-68867Reactome:R-ATH-68949Reactome:R-ATH-68962Reactome:R-ATH-69298RefSeq:NP_178222.4
SMR:Q6EWX1STRING:3702.AT2G01120.2SUPFAM:SSF52540TAIR:AT2G01120tair10-symbols:ATORC4tair10-symbols:ORC4UniGene:At.42515
UniProt:F4IM83UniProt:Q6E7G9UniProt:Q6EWX1UniProt:Q70BT4UniProt:Q9SJV4
Coordinates (TAIR10) chr2:+:85444..88027
Molecular Weight (calculated) 46765.60 Da
IEP (calculated) 8.17
GRAVY (calculated) -0.08
Length 418 amino acids
Sequence (TAIR10)
(BLAST)
001: MGKETPAEKS LNLIRGRLCD PSYVFRPLSA SSDSNYSKLK FIVSTSITEG CNNSMLLLGP RGSGKAAVLD LXXGXLLEQF PDSVSVIRLN GLLHSDDNCA
101: FKEIAKQLCM EHHLLFSKMA SFDDNSQFII AMLRACGLAH KTIIFVLDEF DMFAQGKQRL LYSXLDDAMQ SVTSQAVVVG ISSRLDADQL LEKRVRSRFS
201: HRKFLFLPPS REELDGLFVH LLSLPADSGF PSGYVSRFND KIKNLTSDTR FKDILKTLFN ANSTVNSFLK FIFCAVSLMN LESGLLSLEN FKAALSSMQR
301: QPKLEAVRDC SVLELYLLVC MRRLEVKEQS SYNFISVMKE YKAIHDSFHT SDYYAQNVCL RAFEHLRERQ VICYAENRGQ SQTGEYRLQK LLISASELHQ
401: GMRSHACCPA ILLKLLDH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)