AT3G54750.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; Has 145 Blast hits to 145 proteins in 60 species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:20264833..20268416 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 65230.60 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 7.29 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.37 | ||||||||||||||||||||||||||||
| Length | 589 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTKVVAKRKT PSELRGEQLK RTAFVDQAKE AFDALRPCKS AERENGFKKS ELSKNPKYIE MRMDELYPVK KARPWMLSGK ENSKENGAKQ SSSLINVSLL 101: SNLAATKRQL IREENNASTE VPDDTKAEAR QTNERCSQSI FRSVTQLSTR GEELSCLPDI DMNKALKGLA TCEPLLVHPG DITGEDDTAS LSGSFMSEFQ 201: VSGQKIPLDL SLKTYARLVS SSPLSWLHRS IMGSTYNGMP QLKSLSCNVV NQDNSSGSGA SVVSQVLNSM SLHSWVYPQS TLPPFVISAM VASVSDRGEV 301: DFLQKRKLAW EDAFRSLYFM FRKNLCKVFY VCTSQFVAMF TGSCESGGAK RSCNGYITQS TRRLRAMLKN LDICYSMPLC KTKMDQTTVE DLAELSELEN 401: HNIGQIRRSR SVSNIDNTPE SFLAFVGNES VHGLYDLLLN YRYSFEFLPT ADVPVLSSPV PFQNAALSSP EIKCSEMVKT EHTSCYMVEI KGEYIPPWII 501: SNICANVGAN GQNFEASFVT EPTSVNLNIG LPQVPEKTDP ESRVIEGTGE TNDNASDIPG SVICPQLQSG HLKNLKYCNK SYTVSLSPS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)