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AT1G21250.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Predictors External Curations
AmiGO : plasma membrane 10380805
AmiGO : plasma membrane 11554472
SwissProt : plasma membrane 16381842
TAIR : vacuole 15539469
TAIR : plasma membrane 10380805
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31673584 (2019): extracellular region plant-type cell wall
  • PMID:30447334 (2019): plasma membrane
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:22215637 (2012): plasma membrane
  • PMID:21988472 (2012): plant-type vacuole plant-type vacuole membrane
  • PMID:15539469 (2004): plant-type vacuole
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : cell wall-associated kinase
Curator
Summary (TAIR10)
cell wall-associated kinase, may function as a signaling receptor of extracellular matrix component such as oligogalacturonides.
Computational
Description (TAIR10)
cell wall-associated kinase (WAK1); FUNCTIONS IN: kinase activity; INVOLVED IN: cell surface receptor linked signaling pathway, response to virus, defense response to fungus, response to salicylic acid stimulus; LOCATED IN: plasma membrane, vacuole, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EGF-like calcium-binding (InterPro:IPR001881), EGF-like, type 3 (InterPro:IPR000742), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EGF-like calcium-binding, conserved site (InterPro:IPR018097), EGF-type aspartate/asparagine hydroxylation site (InterPro:IPR000152), EGF calcium-binding (InterPro:IPR013091), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: wall associated kinase 3 (TAIR:AT1G21240.1); Has 130372 Blast hits to 120319 proteins in 4569 species: Archae - 123; Bacteria - 13482; Metazoa - 56283; Fungi - 9380; Plants - 33196; Viruses - 438; Other Eukaryotes - 17470 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G21250-MONOMERBioGrid:23960EC:2.7.11.-eggNOG:COG0515
eggNOG:ENOG410IM0IEMBL:AC036104EMBL:AJ009696EMBL:AK221950
EMBL:AY039917EMBL:BT001967EMBL:CP002684EMBL:L04999
EnsemblPlants:AT1G21250EnsemblPlants:AT1G21250.1entrez:838721Gene3D:2.60.120.200
GeneID:838721Genevisible:Q39191GO:GO:0004674GO:GO:0005509
GO:GO:0005524GO:GO:0005773GO:GO:0005886GO:GO:0009505
GO:GO:0009615GO:GO:0009751GO:GO:0016021GO:GO:0016301
GO:GO:0030247GO:GO:0050832Gramene:AT1G21250.1hmmpanther:PTHR27005
hmmpanther:PTHR27005:SF32HOGENOM:HOG000116550InParanoid:Q39191IntAct:Q39191
InterPro:IPR000152InterPro:IPR000719InterPro:IPR000742InterPro:IPR001245
InterPro:IPR001881InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320
InterPro:IPR018097InterPro:IPR025287KEGG:ath:AT1G21250OMA:LRISCAN
PaxDb:Q39191Pfam:PF07645Pfam:PF07714Pfam:PF13947
Pfam:Q39191Pfscan:PS50011Pfscan:PS50026Pfscan:PS51257
PhylomeDB:Q39191PIR:H86345PRIDE:Q39191PRO:PR:Q39191
PROSITE:PS00010PROSITE:PS00108PROSITE:PS01186PROSITE:PS01187
PROSITE:PS50011PROSITE:PS50026ProteinModelPortal:Q39191Proteomes:UP000006548
RefSeq:NP_564137.1scanprosite:PS00010scanprosite:PS00108scanprosite:PS01187
SMART:SM00179SMART:SM00181SMART:SM00220SMR:Q39191
STRING:3702.AT1G21250.1SUPFAM:SSF56112SUPFAM:SSF57196TAIR:AT1G21250
tair10-symbols:PRO25tair10-symbols:WAK1TMHMM:TMhelixUniGene:At.23880
UniProt:Q39191
Coordinates (TAIR10) chr1:+:7439512..7441892
Molecular Weight (calculated) 81215.60 Da
IEP (calculated) 5.43
GRAVY (calculated) -0.25
Length 735 amino acids
Sequence (TAIR10)
(BLAST)
001: MKVQEGLFLV AIFFSLACTQ LVKGQHQPGE NCQNKCGNIT IEYPFGISSG CYYPGNESFS ITCKEDRPHV LSDIEVANFN HSGQLQVLLN RSSTCYDEQG
101: KKTEEDSSFT LENLSLSANN KLTAVGCNAL SLLDTFGMQN YSTACLSLCD SPPEADGECN GRGCCRVDVS APLDSYTFET TSGRIKHMTS FHDFSPCTYA
201: FLVEDDKFNF SSTEDLLNLR NVMRFPVLLD WSVGNQTCEQ VGSTSICGGN STCLDSTPRN GYICRCNEGF DGNPYLSAGC QDVNECTTSS TIHRHNCSDP
301: KTCRNKVGGF YCKCQSGYRL DTTTMSCKRK EFAWTTILLV TTIGFLVILL GVACIQQRMK HLKDTKLREQ FFEQNGGGML TQRLSGAGPS NVDVKIFTED
401: GMKKATNGYA ESRILGQGGQ GTVYKGILPD NSIVAIKKAR LGDSSQVEQF INEVLVLSQI NHRNVVKLLG CCLETEVPLL VYEFITNGTL FDHLHGSMID
501: SSLTWEHRLK IAIEVAGTLA YLHSSASIPI IHRDIKTANI LLDVNLTAKV ADFGASRLIP MDKEELETMV QGTLGYLDPE YYNTGLLNEK SDVYSFGVVL
601: MELLSGQKAL CFKRPQSSKH LVSYFATATK ENRLDEIIGG EVMNEDNLKE IQEAARIAAE CTRLMGEERP RMKEVAAKLE ALRVEKTKHK WSDQYPEENE
701: HLIGGHILSA QGETSSSIGY DSIKNVAILD IETGR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)