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AT1G15580.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : indole-3-acetic acid inducible 5
Curator
Summary (TAIR10)
auxin induced protein
Computational
Description (TAIR10)
indole-3-acetic acid inducible 5 (IAA5); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to cyclopentenone, response to brassinosteroid stimulus; LOCATED IN: nucleus; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 19 (TAIR:AT3G15540.1); Has 1807 Blast hits to 1806 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1806; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JX5GeggNOG:ENOG41104A5EMBL:GU348539EMBL:GU348540EMBL:GU348541EMBL:GU348542EMBL:HM487638
EMBL:HM487640EMBL:HM487641EMBL:HM487642EMBL:HM487643EMBL:HM487644EMBL:HM487645EMBL:HM487646
EMBL:HM487647EMBL:HM487648EMBL:HM487649EnsemblPlants:AT1G15580EnsemblPlants:AT1G15580.1entrez:838128ExpressionAtlas:D3K0C2
GeneID:838128GO:GO:0005634GO:GO:0006351GO:GO:0006355GO:GO:0009734Gramene:AT1G15580.1hmmpanther:PTHR31734
hmmpanther:PTHR31734:SF12InterPro:IPR000270InterPro:IPR003311InterPro:IPR033389KEGG:ath:AT1G15580KO:K14484OMA:ESECVPI
PANTHER:PTHR31734Pfam:P33078Pfam:PF02309Pfscan:PS51745PhylomeDB:D3K0C2PROSITE:PS51745RefSeq:NP_173011.1
SMR:D3K0C2STRING:3702.AT1G15580.1SUPFAM:SSF54277TAIR:AT1G15580tair10-symbols:ATAUX2-27tair10-symbols:AUX2-27tair10-symbols:IAA5
UniGene:At.28674UniProt:D3K0C2UniProt:P33078
Coordinates (TAIR10) chr1:-:5365764..5366460
Molecular Weight (calculated) 18355.10 Da
IEP (calculated) 6.50
GRAVY (calculated) -0.34
Length 163 amino acids
Sequence (TAIR10)
(BLAST)
001: MANESNNLGL EITELRLGLP GDIVVSGESI SGKKRASPEV EIDLKCEPAK KSQVVGWPPV CSYRRKNSLE RTKSSYVKVS VDGAAFLRKI DLEMYKCYQD
101: LASALQILFG CYINFDDTLK ESECVPIYED KDGDWMLAGD VPWEMFLGSC KRLRIMKRSC NRG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)