AT5G65930.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.705 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : kinesin-like calmodulin-binding protein (ZWICHEL) | ||||||||||||||||||||
| Curator Summary (TAIR10) |
encodes a novel member of the kinesin superfamily of motor proteins. recessive mutations have reduced number of trichome branches. | ||||||||||||||||||||
| Computational Description (TAIR10) |
ZWICHEL (ZWI); FUNCTIONS IN: microtubule motor activity, calmodulin binding; INVOLVED IN: trichome branching, pollen germination; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: FERM central domain (InterPro:IPR019748), Prismane-like (InterPro:IPR011254), MyTH4 domain (InterPro:IPR000857), Kinesin, motor domain (InterPro:IPR001752), FERM, N-terminal (InterPro:IPR018979), Band 4.1 domain (InterPro:IPR019749), Kinesin, motor region, conserved site (InterPro:IPR019821), FERM/acyl-CoA-binding protein, 3-helical bundle (InterPro:IPR014352), FERM domain (InterPro:IPR000299); BEST Arabidopsis thaliana protein match is: Di-glucose binding protein with Kinesin motor domain (TAIR:AT2G22610.1); Has 92234 Blast hits to 53602 proteins in 2354 species: Archae - 1118; Bacteria - 10667; Metazoa - 44581; Fungi - 7061; Plants - 5079; Viruses - 192; Other Eukaryotes - 23536 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:26370369..26376394 | ||||||||||||||||||||
| Molecular Weight (calculated) | 143328.00 Da | ||||||||||||||||||||
| IEP (calculated) | 7.21 | ||||||||||||||||||||
| GRAVY (calculated) | -0.49 | ||||||||||||||||||||
| Length | 1259 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MEGQRGSNSS LSSGNGTEVA TDVSSCFYVP NPSGTDFDAE SSSLPPLSPA PQVALSIPAE LAAAIPLIDR FQVEAFLRLM QKQIQSAGKR GFFYSKKSSG 0101: SNVRERFTFE DMLCFQKDPI PTSLLKINSD LVSRATKLFH LILKYMGVDS SDRSTPPSLD ERIDLVGKLF KKTLKRVELR DELFAQISKQ TRHNPDRQYL 0201: IKAWELMYLC ASSMPPSKDI GGYLSEYIHN VAHDATIEPD AQVLAVNTLK ALKRSIKAGP RHTTPGREEI EALLTGRKLT TIVFFLDETF EEISYDMATT 0301: VSDAVELAGT IKLSAFSSFS LFECRKVVSS SKSSDPGNEE YIGLDDNKYI GDLLAEFKAI KDRNKGEILH CKLVFKKKLF RESDEAVTDL MFVQLSYVQL 0401: QHDYLLGNYP VGRDDAAQLC ALQILVGIGF VNSPESCIDW TSLLERFLPR QIAITRAKRE WELDILARYR SMENVTKDDA RQQFLRILKA LPYGNSVFFS 0501: VRKIDDPIGL LPGRIILGIN KRGVHFFRPV PKEYLHSAEL RDIMQFGSSN TAVFFKMRVA GVLHIFQFET KQGEEICVAL QTHINDVMLR RYSKARSAAN 0601: SLVNGDISCS SKPQNFEVYE KRLQDLSKAY EESQKKIEKL MDEQQEKNQQ EVTLREELEA IHNGLELERR KLLEVTLDRD KLRSLCDEKG TTIQSLMSEL 0701: RGMEARLAKS GNTKSSKETK SELAEMNNQI LYKIQKELEV RNKELHVAVD NSKRLLSENK ILEQNLNIEK KKKEEVEIHQ KRYEQEKKVL KLRVSELENK 0801: LEVLAQDLDS AESTIESKNS DMLLLQNNLK ELEELREMKE DIDRKNEQTA AILKMQGAQL AELEILYKEE QVLRKRYYNT IEDMKGKIRV YCRIRPLNEK 0901: ESSEREKQML TTVDEFTVEH PWKDDKRKQH IYDRVFDMRA SQDDIFEDTK YLVQSAVDGY NVCIFAYGQT GSGKTFTIYG HESNPGLTPR ATKELFNILK 1001: RDSKRFSFSL KAYMVELYQD TLVDLLLPKS ARRLKLEIKK DSKGMVFVEN VTTIPISTLE ELRMILERGS ERRHVSGTNM NEESSRSHLI LSVVIESIDL 1101: QTQSAARGKL SFVDLAGSER VKKSGSAGCQ LKEAQSINKS LSALGDVIGA LSSGNQHIPY RNHKLTMLMS DSLGGNAKTL MFVNVSPAES NLDETYNSLL 1201: YASRVRTIVN DPSKHISSKE MVRLKKLVAY WKEQAGKKGE EEDLVDIEED RTRKDEADS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)