AT5G52280.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Myosin heavy chain-related protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Myosin heavy chain-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Myosin heavy chain-related protein (TAIR:AT1G63300.1); Has 217843 Blast hits to 105430 proteins in 3541 species: Archae - 2871; Bacteria - 41932; Metazoa - 88690; Fungi - 17315; Plants - 10871; Viruses - 1027; Other Eukaryotes - 55137 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:21226959..21230109 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 98507.50 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 4.77 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.99 | ||||||||||||||||||||||||||||
| Length | 853 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MFKSWRNDKN KIKAVFKLQF QATQVPKLKK TALMISLVPD DVGKPTFKLE KSEVKEGICS WENPIYVSVK LIKEPKTGIV REKIYHFVVA TGSSKSGFLG 101: EASIDFADFL TEADPLTVSL PLKFANSGAV LNVTIHKIQG ASDLKFIEEN KDQTLSKEDS FKSLQSNDDL EGYNQDERSL DVNTAKNAGL GGSFDSIGES 201: GWIDDGNARL PQRHNSVPAT RNGHRRSNTD WSASSTSDES YIESRNSPEN SFQRGFSSVT ESSDPIERLK MELEALRRQS ELSELEKQSL RKQAIKESKR 301: IQELSKEVSC LKGERDGAME ECEKLRLQNS RDEADAESRL RCISEDSSNM IEEIRDELSC EKDLTSNLKL QLQRTQESNS NLILAVRDLN EMLEQKNNEI 401: SSLNSLLEEA KKLEEHKGMD SGNNEIDTLK QQIEDLDWEL DSYKKKNEEQ EILLDELTQE YESLKEENYK NVSSKLEQQE CSNAEDEYLD SKDIIDELKS 501: QIEILEGKLK QQSLEYSECL ITVNELESQV KELKKELEDQ AQAYDEDIDT MMREKTEQEQ RAIKAEENLR KTRWNNAITA ERLQEKCKRL SLEMESKLSE 601: HENLTKKTLA EANNLRLQNK TLEEMQEKTH TEITQEKEQR KHVEEKNKAL SMKVQMLESE VLKLTKLRDE SSAAATETEK IIQEWRKERD EFERKLSLAK 701: EVAKTAQKEL TLTKSSNDDK ETRLRNLKTE VEGLSLQYSE LQNSFVQEKM ENDELRKQVS NLKVDIRRKE EEMTKILDAR MEARSQENGH KEENLSKLSD 801: ELAYCKNKNS SMERELKEME ERYSEISLRF AEVEGERQQL VMAVRNLKNG KKF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)